RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RSPH10B2B2RC85 870 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 CLIC2O15247 247 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 SPOPO43791 374 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 PLOD3O60568 738 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 LRRN2O75325 713 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 ENTPD5O75356 428 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 ATP5BP06576 529 aaKnown RBP8.41□□□□□ -1.06
VTI1A-202ENST00000432306 RSPH10BP0C881 870 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 IL1R1P14778 569 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 CAPN3P20807 821 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 IGFBP4P22692 258 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 RAD52P43351 418 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 TRPC1P48995 793 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 FMO1Q01740 532 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 SP3Q02447 781 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 CDK18Q07002 472 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 DNAJC3Q13217 504 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 HNRNPDQ14103 355 aaKnown RBP8.41□□□□□ -1.06
VTI1A-202ENST00000432306 GBX1Q14549 363 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 MESDQ14696 234 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 LINC01559Q495D7 138 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 ACSBG2Q5FVE4 666 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 C16orf46Q6P387 395 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 IGF2-ASQ6U949 168 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 OTOAQ7RTW8 1153 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 CCDC25Q86WR0 208 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 SPNS2Q8IVW8 549 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 FAM81AQ8TBF8 368 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 NRG4Q8WWG1 115 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 TTC17Q96AE7 1141 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 EAF1Q96JC9 268 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-202ENST00000432306 TNIP3Q96KP6 325 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 ARHGAP9Q9BRR9 750 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 DHRS4Q9BTZ2 278 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 NUP85Q9BW27 656 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 MRPL9Q9BYD2 267 aaKnown RBP8.41□□□□□ -1.06
VTI1A-202ENST00000432306 BHMT2Q9H2M3 363 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 PIDD1Q9HB75 910 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 CHST7Q9NS84 486 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 ZDHHC7Q9NXF8 308 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 ASIC3Q9UHC3 531 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 ZFP69BQ9UJL9 534 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 SSX2IPQ9Y2D8 614 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 COQ4Q9Y3A0 265 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 CDK5RAP2Q96SN8 1893 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 FOCADQ5VW36 1801 aa8.41□□□□□ -1.06
VTI1A-202ENST00000432306 TMEM110-MUSTN1A8MSY1 372 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 TM9SF1O15321 606 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 CLDN3O15551 220 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 TBX10O75333 385 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 PSMG1O95456 288 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 MYBL1P10243 752 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 TSHRP16473 764 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 ATF7P17544 494 aaPredicted RBP8.4□□□□□ -1.06
VTI1A-202ENST00000432306 CRABP2P29373 138 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 PLIN5Q00G26 463 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 SF3A3Q12874 501 aaKnown RBP eCLIP8.4□□□□□ -1.06
VTI1A-202ENST00000432306 PPP2R5CQ13362 524 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 DLGAP5Q15398 846 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 TAF1BQ53T94 588 aaPredicted RBP8.4□□□□□ -1.06
VTI1A-202ENST00000432306 EFHC2Q5JST6 749 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 SYDE2Q5VT97 1194 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 RNF220Q5VTB9 566 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 FAM180BQ6P0A1 224 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 FAM47EQ6ZV65 393 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 CHSY1Q86X52 802 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 PPFIBP2Q8ND30 876 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 PHC3Q8NDX5 983 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 UCMAQ8WVF2 138 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 SCG3Q8WXD2 468 aaKnown RBP8.4□□□□□ -1.06
VTI1A-202ENST00000432306 ZNF75CPQ92670 426 aaPredicted RBP8.4□□□□□ -1.06
VTI1A-202ENST00000432306 SHDQ96IW2 340 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 WNK4Q96J92 1243 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 FGD4Q96M96 766 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 POP1Q99575 1024 aaKnown RBP8.4□□□□□ -1.06
VTI1A-202ENST00000432306 ZNF184Q99676 751 aaPredicted RBP8.4□□□□□ -1.06
VTI1A-202ENST00000432306 VCX3BQ9H321 246 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 ST6GALNAC4Q9H4F1 302 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 VCX3AQ9NNX9 186 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 KRT82Q9NSB4 513 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 KANSL3Q9P2N6 904 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 ANKFY1Q9P2R3 1169 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 HCSTQ9UBK5 93 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 GRID1Q9ULK0 1009 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 TMCO1Q9UM00 188 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 PHF24Q9UPV7 400 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 TMX2Q9Y320 296 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.4□□□□□ -1.06
VTI1A-202ENST00000432306 PCDHB9Q9Y5E1 797 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 PCDHGB3Q9Y5G1 929 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 COMMD3-BMI1R4GMX3 469 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 UMODL1Q5DID0 1318 aa8.4□□□□□ -1.06
VTI1A-202ENST00000432306 A0A1B0GVC2 190 aa8.4□□□□□ -1.07
VTI1A-202ENST00000432306 F5H423 210 aaPredicted RBP8.4□□□□□ -1.07
VTI1A-202ENST00000432306 KLF11O14901 512 aa8.4□□□□□ -1.07
VTI1A-202ENST00000432306 ALOX15BO15296 676 aa8.4□□□□□ -1.07
VTI1A-202ENST00000432306 PSTPIP1O43586 416 aa8.4□□□□□ -1.07
VTI1A-202ENST00000432306 ATP9AO75110 1047 aa8.4□□□□□ -1.07
VTI1A-202ENST00000432306 RFPL3O75679 317 aa8.4□□□□□ -1.07
VTI1A-202ENST00000432306 CBX6O95503 412 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms