RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 HDDC3Q8N4P3 179 aa10.29□□□□□ -0.76
FN1-209ENST00000432072 ZDHHC6Q9H6R6 413 aa10.29□□□□□ -0.76
FN1-209ENST00000432072 EVPLLA8MZ36 301 aa10.29□□□□□ -0.76
FN1-209ENST00000432072 EXOSC10Q01780 885 aaKnown RBP10.29□□□□□ -0.76
FN1-209ENST00000432072 MAP3K10Q02779 954 aa10.29□□□□□ -0.76
FN1-209ENST00000432072 INSCQ1MX18 579 aa10.29□□□□□ -0.76
FN1-209ENST00000432072 FAM83EQ2M2I3 478 aa10.29□□□□□ -0.76
FN1-209ENST00000432072 GPSM3Q9Y4H4 160 aa10.29□□□□□ -0.76
FN1-209ENST00000432072 SPRP35270 261 aaPredicted RBP10.29□□□□□ -0.76
FN1-209ENST00000432072 KIRREL3Q8IZU9 778 aa10.29□□□□□ -0.76
FN1-209ENST00000432072 C1orf131Q8NDD1 294 aaKnown RBP10.29□□□□□ -0.76
FN1-209ENST00000432072 HIPK4Q8NE63 616 aa10.29□□□□□ -0.76
FN1-209ENST00000432072 FBXO2Q9UK22 296 aaPredicted RBP10.29□□□□□ -0.76
FN1-209ENST00000432072 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.29□□□□□ -0.76
FN1-209ENST00000432072 TGM2P21980 687 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 PMS2P54278 862 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 HDAC4P56524 1084 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ALDH6A1Q02252 535 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 ARID5BQ14865 1188 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 NUGGCQ68CJ6 796 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 FAM47EQ6ZV65 393 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 NT5DC3Q86UY8 548 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 KAT2BQ92831 832 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 KLHL29Q96CT2 875 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 CNPY3Q9BT09 278 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ZNHIT2Q9UHR6 403 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 DNTTP04053 509 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 INHAP05111 366 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 FDFT1P37268 417 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 UBXN2BQ14CS0 331 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 TEAD4Q15561 434 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 POM121L1PQ3SYA9 428 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ANKRD23Q86SG2 305 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 TMEM86AQ8N2M4 240 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 C17orf80Q9BSJ5 609 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 EIF2AQ9BY44 585 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 RPRD1BQ9NQG5 326 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 KLF15Q9UIH9 416 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 CCDC189A1A4V9 331 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ZNF839A8K0R7 811 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 APODP05090 189 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 KRT16P08779 473 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ACAT1P24752 427 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 BOLA3Q53S33 107 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 MOXD1Q6UVY6 613 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 PPP1R13LQ8WUF5 828 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 SERPINB11Q96P15 392 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 PDCD2LQ9BRP1 358 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 MKNK1Q9BUB5 465 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ZFYVE1Q9HBF4 777 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ATP6V1C1P21283 382 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 PTPN7P35236 360 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 DHX34Q14147 1143 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 SUGP1Q8IWZ8 645 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 MYRIPQ8NFW9 859 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 MCOLN3Q8TDD5 553 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 RRN3Q9NYV6 651 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 PADI4Q9UM07 663 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 CACNA1SQ13698 1873 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 RGPD5Q99666 1765 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 FOXP2O15409 715 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 TBC1D12O60347 775 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 STAU1O95793 577 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 CD52P31358 61 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 PSMC6P62333 389 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 FPGSQ05932 587 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ACTN3Q08043 901 aaPredicted RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 DMC1Q14565 340 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 PKN2Q16513 984 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 HECTD3Q5T447 861 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ACAD10Q6JQN1 1059 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 TMEM159Q96B96 161 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 ANGPTL2Q9UKU9 493 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 CCL16O15467 120 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 GYG2O15488 501 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 NUDT14O95848 222 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 GSNP06396 782 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 AGAP9Q5VTM2 703 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 FAM46CQ5VWP2 391 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 APOBEC3HQ6NTF7 200 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 SHC4Q6S5L8 630 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 GOLPH3LQ9H4A5 285 aa10.28□□□□□ -0.76
FN1-209ENST00000432072 CHORDC1Q9UHD1 332 aaPredicted RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 NDRG2Q9UN36 371 aaKnown RBP10.28□□□□□ -0.76
FN1-209ENST00000432072 SALL1Q9NSC2 1324 aa10.27□□□□□ -0.76
FN1-209ENST00000432072 CST8O60676 142 aa10.27□□□□□ -0.76
FN1-209ENST00000432072 USP17L7P0C7H9 530 aa10.27□□□□□ -0.76
FN1-209ENST00000432072 FAM133BQ5BKY9 247 aaKnown RBP10.27□□□□□ -0.76
FN1-209ENST00000432072 TRAPPC5Q8IUR0 188 aa10.27□□□□□ -0.76
FN1-209ENST00000432072 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.27□□□□□ -0.76
FN1-209ENST00000432072 MARCH2Q9P0N8 246 aa10.27□□□□□ -0.76
FN1-209ENST00000432072 CAPN7Q9Y6W3 813 aa10.27□□□□□ -0.76
FN1-209ENST00000432072 FAM187AA6NFU0 413 aa10.27□□□□□ -0.77
FN1-209ENST00000432072 GNSP15586 552 aa10.27□□□□□ -0.77
FN1-209ENST00000432072 SHMT1P34896 483 aa10.27□□□□□ -0.77
FN1-209ENST00000432072 PRIM2P49643 509 aa10.27□□□□□ -0.77
FN1-209ENST00000432072 SLC16A1P53985 500 aa10.27□□□□□ -0.77
FN1-209ENST00000432072 SNRPD1P62314 119 aaKnown RBP10.27□□□□□ -0.77
FN1-209ENST00000432072 STOX1Q6ZVD7 989 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms