RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 SMIM23A6NLE4 172 aa20.42■□□□□ 0.86
VRK2-205ENST00000432057 INHAP05111 366 aa20.42■□□□□ 0.86
VRK2-205ENST00000432057 LHX1P48742 406 aa20.42■□□□□ 0.86
VRK2-205ENST00000432057 RABGGTBP53611 331 aa20.42■□□□□ 0.86
VRK2-205ENST00000432057 ADCY1Q08828 1119 aa20.42■□□□□ 0.86
VRK2-205ENST00000432057 TIGD5Q53EQ6 642 aa20.42■□□□□ 0.86
VRK2-205ENST00000432057 EPS8L3Q8TE67 593 aaKnown RBP20.42■□□□□ 0.86
VRK2-205ENST00000432057 CENPIQ92674 756 aaPredicted RBP20.42■□□□□ 0.86
VRK2-205ENST00000432057 RNF157Q96PX1 679 aa20.42■□□□□ 0.86
VRK2-205ENST00000432057 TBCBQ99426 244 aa20.42■□□□□ 0.86
VRK2-205ENST00000432057 CEP350Q5VT06 3117 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 DCDC2CA8MYV0 355 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 MCF2LO15068 1137 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 MDM4O15151 490 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 FAM200BP0CF97 657 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 MAP3K7CLP57077 242 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 GNGT1P63211 74 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 PDK2Q15119 407 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 ARCQ7LC44 396 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 FAM35AQ86V20 835 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 UNC45BQ8IWX7 931 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 PXYLP1Q8TE99 480 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 PGBD4Q96DM1 585 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.41■□□□□ 0.86
VRK2-205ENST00000432057 NINJ2Q9NZG7 142 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 TPX2Q9ULW0 747 aaKnown RBP20.41■□□□□ 0.86
VRK2-205ENST00000432057 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.41■□□□□ 0.86
VRK2-205ENST00000432057 TLDC2A0PJX2 215 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 MYBPHLA2RUH7 354 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 MOXD2PA6NHM9 499 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 CKBP12277 381 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 IL4RP24394 825 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 BRCC3P46736 316 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 GRIK3Q13003 919 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 TFDP2Q14188 446 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 NOMO1Q15155 1222 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 EFHC1Q5JVL4 640 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 ECHDC2Q86YB7 292 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 MAP7D3Q8IWC1 876 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 DEFB106AQ8N104 65 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 ZCCHC9Q8N567 271 aaKnown RBP20.41■□□□□ 0.86
VRK2-205ENST00000432057 SPATA18Q8TC71 538 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.41■□□□□ 0.86
VRK2-205ENST00000432057 HASPINQ8TF76 798 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 FAM149B1Q96BN6 582 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 NCAPGQ9BPX3 1015 aa20.41■□□□□ 0.86
VRK2-205ENST00000432057 DAB1O75553 588 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 RBP3P10745 1247 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 ODC1P11926 461 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 ACTN2P35609 894 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 NDUFV1P49821 464 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 KYNUQ16719 465 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 ANKRD20A8PQ5CZ79 823 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 RNASEH2BQ5TBB1 312 aaKnown RBP20.4■□□□□ 0.86
VRK2-205ENST00000432057 EMC10Q5UCC4 262 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 LHX8Q68G74 356 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 C1orf228Q6PIY5 440 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 TRAF7Q6Q0C0 670 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 B4GALNT4Q76KP1 1039 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 PQLC3Q8N755 202 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 RSAD2Q8WXG1 361 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 KCTD13Q8WZ19 329 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 TLCD1Q96CP7 247 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 PCED1BQ96HM7 432 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 LRRC4Q9HBW1 653 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 CALCOCO1Q9P1Z2 691 aa20.4■□□□□ 0.86
VRK2-205ENST00000432057 A0A1W2PQ45 241 aaPredicted RBP20.39■□□□□ 0.86
VRK2-205ENST00000432057 A0A1W2PQY0 241 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 CAPN15O75808 1086 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 AP1G2O75843 785 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 TTC4O95801 387 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 MATKP42679 507 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 SULT1E1P49888 294 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 MAGOHP61326 146 aaKnown RBP20.39■□□□□ 0.86
VRK2-205ENST00000432057 MRPS5P82675 430 aaKnown RBP20.39■□□□□ 0.86
VRK2-205ENST00000432057 MBTPS1Q14703 1052 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 PPP6R3Q5H9R7 873 aaPredicted RBP20.39■□□□□ 0.86
VRK2-205ENST00000432057 ERMARDQ5T6L9 678 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 CD300LGQ6UXG3 332 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 LEKR1Q6ZMV7 388 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 ZNF598Q86UK7 904 aaKnown RBP20.39■□□□□ 0.86
VRK2-205ENST00000432057 SIX6OS1Q8N1H7 587 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 CCDC185Q8N715 623 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 PCDH19Q8TAB3 1148 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 SMOQ99835 787 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 RTP3Q9BQQ7 232 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 TMEM109Q9BVC6 243 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 TMEM30AQ9NV96 361 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 CDH9Q9ULB4 789 aa20.39■□□□□ 0.86
VRK2-205ENST00000432057 B3GAT3O94766 335 aa20.39■□□□□ 0.85
VRK2-205ENST00000432057 SLCO1A2P46721 670 aa20.39■□□□□ 0.85
VRK2-205ENST00000432057 VEGFBP49765 207 aa20.39■□□□□ 0.85
VRK2-205ENST00000432057 IRAK1P51617 712 aa20.39■□□□□ 0.85
VRK2-205ENST00000432057 CACNA2D1P54289 1103 aa20.39■□□□□ 0.85
VRK2-205ENST00000432057 ROR1Q01973 937 aa20.39■□□□□ 0.85
VRK2-205ENST00000432057 TUSC3Q13454 348 aa20.39■□□□□ 0.85
VRK2-205ENST00000432057 MORF4L2Q15014 288 aa20.39■□□□□ 0.85
VRK2-205ENST00000432057 OTUD1Q5VV17 481 aaPredicted RBP20.39■□□□□ 0.85
VRK2-205ENST00000432057 ZC3H18Q86VM9 953 aaKnown RBP20.39■□□□□ 0.85
VRK2-205ENST00000432057 PLD5Q8N7P1 536 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms