RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 GALEQ14376 348 aa2.56□□□□□ -2
CDC40-204ENST00000431461 CLCA4Q14CN2 919 aa2.56□□□□□ -2
CDC40-204ENST00000431461 PDCD2Q16342 344 aaPredicted RBP2.56□□□□□ -2
CDC40-204ENST00000431461 ST3GAL2Q16842 350 aa2.56□□□□□ -2
CDC40-204ENST00000431461 LONRF1Q17RB8 773 aa2.56□□□□□ -2
CDC40-204ENST00000431461 CEP78Q5JTW2 689 aa2.56□□□□□ -2
CDC40-204ENST00000431461 MRNIPQ6NTE8 343 aa2.56□□□□□ -2
CDC40-204ENST00000431461 SWSAP1Q6NVH7 229 aa2.56□□□□□ -2
CDC40-204ENST00000431461 WDR53Q7Z5U6 358 aaPredicted RBP2.56□□□□□ -2
CDC40-204ENST00000431461 TTC30AQ86WT1 665 aa2.56□□□□□ -2
CDC40-204ENST00000431461 SLC15A3Q8IY34 581 aa2.56□□□□□ -2
CDC40-204ENST00000431461 FAM9AQ8IZU1 332 aaPredicted RBP2.56□□□□□ -2
CDC40-204ENST00000431461 CCDC33Q8N5R6 958 aa2.56□□□□□ -2
CDC40-204ENST00000431461 PCSK9Q8NBP7 692 aaKnown RBP2.56□□□□□ -2
CDC40-204ENST00000431461 CYP2W1Q8TAV3 490 aa2.56□□□□□ -2
CDC40-204ENST00000431461 HMCESQ96FZ2 354 aa2.56□□□□□ -2
CDC40-204ENST00000431461 ZDHHC12Q96GR4 267 aa2.56□□□□□ -2
CDC40-204ENST00000431461 LRIG1Q96JA1 1093 aa2.56□□□□□ -2
CDC40-204ENST00000431461 SLC46A1Q96NT5 459 aa2.56□□□□□ -2
CDC40-204ENST00000431461 P2RX7Q99572 595 aaKnown RBP2.56□□□□□ -2
CDC40-204ENST00000431461 EBF3Q9H4W6 596 aa2.56□□□□□ -2
CDC40-204ENST00000431461 SMURF2Q9HAU4 748 aa2.56□□□□□ -2
CDC40-204ENST00000431461 NECTIN3Q9NQS3 549 aa2.56□□□□□ -2
CDC40-204ENST00000431461 EHD3Q9NZN3 535 aa2.56□□□□□ -2
CDC40-204ENST00000431461 MYO1AQ9UBC5 1043 aa2.56□□□□□ -2
CDC40-204ENST00000431461 HDAC9Q9UKV0 1011 aa2.56□□□□□ -2
CDC40-204ENST00000431461 CAPN11Q9UMQ6 739 aa2.56□□□□□ -2
CDC40-204ENST00000431461 NFU1Q9UMS0 254 aa2.56□□□□□ -2
CDC40-204ENST00000431461 PCDHGB6Q9Y5F9 930 aa2.56□□□□□ -2
CDC40-204ENST00000431461 NOTCH4Q99466 2003 aa2.56□□□□□ -2
CDC40-204ENST00000431461 A0A1W2PPC4 97 aa2.55□□□□□ -2
CDC40-204ENST00000431461 TISP43B9A030 160 aa2.55□□□□□ -2
CDC40-204ENST00000431461 E9PLN8 166 aa2.55□□□□□ -2
CDC40-204ENST00000431461 APAF1O14727 1248 aa2.55□□□□□ -2
CDC40-204ENST00000431461 CCNT2O60583 730 aaKnown RBP2.55□□□□□ -2
CDC40-204ENST00000431461 SNX2O60749 519 aa2.55□□□□□ -2
CDC40-204ENST00000431461 GLP2RO95838 553 aa2.55□□□□□ -2
CDC40-204ENST00000431461 FAM163BP0C2L3 166 aa2.55□□□□□ -2
CDC40-204ENST00000431461 NR2F6P10588 404 aa2.55□□□□□ -2
CDC40-204ENST00000431461 SLC5A1P13866 664 aa2.55□□□□□ -2
CDC40-204ENST00000431461 SFPQP23246 707 aaKnown RBP eCLIP2.55□□□□□ -2
CDC40-204ENST00000431461 TECP42680 631 aa2.55□□□□□ -2
CDC40-204ENST00000431461 PHKA1P46020 1223 aa2.55□□□□□ -2
CDC40-204ENST00000431461 ALDH9A1P49189 494 aa2.55□□□□□ -2
CDC40-204ENST00000431461 ALDH5A1P51649 535 aaPredicted RBP2.55□□□□□ -2
CDC40-204ENST00000431461 DGKEP52429 567 aa2.55□□□□□ -2
CDC40-204ENST00000431461 ZNF134P52741 427 aa2.55□□□□□ -2
CDC40-204ENST00000431461 PRKAG1P54619 331 aa2.55□□□□□ -2
CDC40-204ENST00000431461 BCAT1P54687 386 aa2.55□□□□□ -2
CDC40-204ENST00000431461 SUMO2P61956 95 aaKnown RBP2.55□□□□□ -2
CDC40-204ENST00000431461 RPS16P62249 146 aaKnown RBP2.55□□□□□ -2
CDC40-204ENST00000431461 TNFAIP2Q03169 654 aa2.55□□□□□ -2
CDC40-204ENST00000431461 BMPR2Q13873 1038 aa2.55□□□□□ -2
CDC40-204ENST00000431461 TBC1D25Q3MII6 688 aa2.55□□□□□ -2
CDC40-204ENST00000431461 ARL13BQ3SXY8 428 aa2.55□□□□□ -2
CDC40-204ENST00000431461 PLA1AQ53H76 456 aa2.55□□□□□ -2
CDC40-204ENST00000431461 TAF2Q6P1X5 1199 aa2.55□□□□□ -2
CDC40-204ENST00000431461 PGBD2Q6P3X8 592 aa2.55□□□□□ -2
CDC40-204ENST00000431461 TMEM108Q6UXF1 575 aa2.55□□□□□ -2
CDC40-204ENST00000431461 USP43Q70EL4 1123 aa2.55□□□□□ -2
CDC40-204ENST00000431461 SRLQ86TD4 932 aa2.55□□□□□ -2
CDC40-204ENST00000431461 DTX2Q86UW9 622 aa2.55□□□□□ -2
CDC40-204ENST00000431461 MICU3Q86XE3 530 aa2.55□□□□□ -2
CDC40-204ENST00000431461 FAM109AQ8N4B1 249 aa2.55□□□□□ -2
CDC40-204ENST00000431461 RP9Q8TA86 221 aaKnown RBP2.55□□□□□ -2
CDC40-204ENST00000431461 PMM1Q92871 262 aa2.55□□□□□ -2
CDC40-204ENST00000431461 REPS1Q96D71 796 aa2.55□□□□□ -2
CDC40-204ENST00000431461 TMEM41AQ96HV5 264 aa2.55□□□□□ -2
CDC40-204ENST00000431461 SNX27Q96L92 541 aa2.55□□□□□ -2
CDC40-204ENST00000431461 RPS6KC1Q96S38 1066 aa2.55□□□□□ -2
CDC40-204ENST00000431461 VKORC1Q9BQB6 163 aa2.55□□□□□ -2
CDC40-204ENST00000431461 NAA15Q9BXJ9 866 aaKnown RBP2.55□□□□□ -2
CDC40-204ENST00000431461 TPSD1Q9BZJ3 242 aa2.55□□□□□ -2
CDC40-204ENST00000431461 TRIM5Q9C035 493 aa2.55□□□□□ -2
CDC40-204ENST00000431461 TTYH3Q9C0H2 523 aa2.55□□□□□ -2
CDC40-204ENST00000431461 CERS4Q9HA82 394 aa2.55□□□□□ -2
CDC40-204ENST00000431461 ZBTB26Q9HCK0 441 aa2.55□□□□□ -2
CDC40-204ENST00000431461 TMEM8AQ9HCN3 771 aa2.55□□□□□ -2
CDC40-204ENST00000431461 TUBA8Q9NY65 449 aaPredicted RBP2.55□□□□□ -2
CDC40-204ENST00000431461 COL20A1Q9P218 1284 aa2.55□□□□□ -2
CDC40-204ENST00000431461 CPNE7Q9UBL6 633 aa2.55□□□□□ -2
CDC40-204ENST00000431461 ITGB1BP2Q9UKP3 347 aa2.55□□□□□ -2
CDC40-204ENST00000431461 SLC45A2Q9UMX9 530 aa2.55□□□□□ -2
CDC40-204ENST00000431461 USP19O94966 1318 aa2.54□□□□□ -2
CDC40-204ENST00000431461 CYP2D7A0A087X1C5 515 aa2.54□□□□□ -2
CDC40-204ENST00000431461 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
CDC40-204ENST00000431461 KCNU1A8MYU2 1149 aa2.54□□□□□ -2
CDC40-204ENST00000431461 PRRT4C9JH25 899 aa2.54□□□□□ -2
CDC40-204ENST00000431461 SMIM22K7EJ46 135 aa2.54□□□□□ -2
CDC40-204ENST00000431461 ADAMTS3O15072 1205 aa2.54□□□□□ -2
CDC40-204ENST00000431461 RGS10O43665 173 aa2.54□□□□□ -2
CDC40-204ENST00000431461 COQ9O75208 318 aa2.54□□□□□ -2
CDC40-204ENST00000431461 PIAS2O75928 621 aa2.54□□□□□ -2
CDC40-204ENST00000431461 NHLRC4P0CG21 123 aaPredicted RBP2.54□□□□□ -2
CDC40-204ENST00000431461 MYBP10242 640 aa2.54□□□□□ -2
CDC40-204ENST00000431461 TSHRP16473 764 aa2.54□□□□□ -2
CDC40-204ENST00000431461 ZFXP17010 805 aaPredicted RBP2.54□□□□□ -2
CDC40-204ENST00000431461 FGFR2P21802 821 aa2.54□□□□□ -2
CDC40-204ENST00000431461 TNFSF4P23510 183 aa2.54□□□□□ -2
CDC40-204ENST00000431461 ARHGAP25P42331 645 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms