RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TMEM160Q9NX00 188 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 CNTN6Q9UQ52 1028 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 SLC27A6Q9Y2P4 619 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 TMEM98Q9Y2Y6 226 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 RB1CC1Q8TDY2 1594 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 LOC105369274A0A096LPK9 316 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 LOC102723532A0A0G2JNH3 316 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 RRN3P2A6NIE6 340 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 PPM1DO15297 605 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 HOXC11O43248 304 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 RGS10O43665 173 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 RPP40O75818 363 aaKnown RBP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 TJP3O95049 919 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 CYP21A2P08686 494 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 EGR2P11161 476 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 JUPP14923 745 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 DDX6P26196 483 aaKnown RBP eCLIP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 ITPKBP27987 946 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 DDIT3P35638 169 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 CCR5P51681 352 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 TLE2Q04725 743 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 CUL4BQ13620 913 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 KCNJ12Q14500 433 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 PRKD1Q15139 912 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 LY6KQ17RY6 165 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 AASDHQ4L235 1098 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 TTLL10Q6ZVT0 673 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 RAB11FIP2Q7L804 512 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 MAVSQ7Z434 540 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 GPR149Q86SP6 731 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 TRABD2AQ86V40 505 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 COLGALT2Q8IYK4 626 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 OR4N4Q8N0Y3 316 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 LRRC71Q8N4P6 559 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 SSH3Q8TE77 659 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 CACTINQ8WUQ7 758 aaKnown RBP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 OSCP1Q8WVF1 389 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 RNF31Q96EP0 1072 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 MPP4Q96JB8 637 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 SENP7Q9BQF6 1050 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 PYM1Q9BRP8 204 aaKnown RBP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 FAM167BQ9BTA0 163 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 EPS8L2Q9H6S3 715 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 ST6GALNAC2Q9UJ37 374 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 C19orf53Q9UNZ5 99 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 FZD1Q9UP38 647 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 SH2B3Q9UQQ2 575 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 DRG1Q9Y295 367 aaKnown RBP3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 TCAF1Q9Y4C2 921 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 ADGRA2Q96PE1 1338 aa3.64□□□□□ -1.83
HMGB1P27-201ENST00000431429 TRGV11A0A075B6L2 103 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 PNMA6EA0A0J9YXQ4 647 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 CENPVL1A0A0U1RR11 272 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 A8MVJ9 347 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 VWC2LB2RUY7 222 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 J3KRW8 73 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 CTIFO43310 598 aaKnown RBP3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 FAM20BO75063 409 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 WDR47O94967 919 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 CNPP09543 421 aaKnown RBP3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 SRGAP2BP0DMP2 458 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 PRKAR1BP31321 381 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 MCM2P49736 904 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 NXPH1P58417 271 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 ACTR2P61160 394 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 ITIH3Q06033 890 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 BTBD16Q32M84 506 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 ADCK5Q3MIX3 580 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 SPDYE7PQ495Y7 208 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 PREPLQ4J6C6 727 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 DEPDC1Q5TB30 811 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 MAP3K21Q5TCX8 1036 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 ZNF585AQ6P3V2 769 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 CCDC117Q8IWD4 279 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 SUPT20HQ8NEM7 779 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 MYCBPAPQ8TBZ2 947 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 RFKQ969G6 155 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 TRIM63Q969Q1 353 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 GRAMD1AQ96CP6 724 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 TWNKQ96RR1 684 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 EIF2AK1Q9BQI3 630 aaKnown RBP3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 TTPALQ9BTX7 342 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 ACTRT3Q9BYD9 372 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 RIC8AQ9NPQ8 531 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 NFU1Q9UMS0 254 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 ZBTB1Q9Y2K1 713 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 CRYL1Q9Y2S2 319 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 NOX1Q9Y5S8 564 aa3.63□□□□□ -1.83
HMGB1P27-201ENST00000431429 A1L4Q6 167 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 SLC38A8A6NNN8 435 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 M0QZQ0 153 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 MUSKO15146 869 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 SLC16A3O15427 465 aaKnown RBP3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 ZSCAN9O15535 394 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 SPRY2O43597 315 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 NDUFA10O95299 355 aa3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 LMNAP02545 664 aaKnown RBP3.62□□□□□ -1.83
HMGB1P27-201ENST00000431429 TFRCP02786 760 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms