RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 DCAF12L1Q5VU92 463 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 ANO7Q6IWH7 933 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 TPH2Q8IWU9 490 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 ZBTB34Q8NCN2 500 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 GPATCH3Q96I76 525 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 DPH1Q9BZG8 443 aa5.68□□□□□ -1.5
PTPN4-204ENST00000431283 CARMIL1Q5VZK9 1371 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 TNIKQ9UKE5 1360 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 CAPN8A6NHC0 703 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 TMEM233B4DJY2 109 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 INSIG1O15503 277 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 AKAP10O43572 662 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 TMPRSS11DO60235 418 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 RAB27AP51159 221 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 IGBP1P78318 339 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 PSG6Q00889 435 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 LMAN2Q12907 356 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 CC2D1BQ5T0F9 858 aaKnown RBP5.67□□□□□ -1.5
PTPN4-204ENST00000431283 MEX3CQ5U5Q3 659 aaKnown RBP5.67□□□□□ -1.5
PTPN4-204ENST00000431283 VSTM1Q6UX27 236 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 NPNTQ6UXI9 565 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 C16orf52Q8NHV5 167 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 VN1R3Q9BXE9 311 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 B3GNT5Q9BYG0 378 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 ASIC5Q9NY37 505 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 MGAT4CQ9UBM8 478 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 HDAC9Q9UKV0 1011 aa5.67□□□□□ -1.5
PTPN4-204ENST00000431283 PLB1Q6P1J6 1458 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 RUSC2Q8N2Y8 1516 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 NTN1O95631 604 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 PDGFRBP09619 1106 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 MYBP10242 640 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 AGFG1P52594 562 aaKnown RBP5.66□□□□□ -1.5
PTPN4-204ENST00000431283 EPHB1P54762 984 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 ZNF91Q05481 1191 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 B3GNT9Q6UX72 402 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 DCDC5Q6ZRR9 648 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 MAEAQ7L5Y9 396 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 NSMCE1Q8WV22 266 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 XPNPEP3Q9NQH7 507 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 SACM1LQ9NTJ5 587 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 DDX56Q9NY93 547 aaKnown RBP5.66□□□□□ -1.5
PTPN4-204ENST00000431283 LPAR3Q9UBY5 353 aa5.66□□□□□ -1.5
PTPN4-204ENST00000431283 DIP2BQ9P265 1576 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 CFAP69A5D8W1 941 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 MBD3L4A6NDZ8 208 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-204ENST00000431283 MBD3L3A6NE82 208 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-204ENST00000431283 CCP110O43303 1012 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 BRAFP15056 766 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 TKTP29401 623 aaKnown RBP5.65□□□□□ -1.5
PTPN4-204ENST00000431283 UQCRC1P31930 480 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 KCNB1Q14721 858 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 RBMS2Q15434 407 aaKnown RBP5.65□□□□□ -1.5
PTPN4-204ENST00000431283 ZNF517Q6ZMY9 492 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-204ENST00000431283 NRACQ8N912 160 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 IL31RAQ8NI17 732 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 STK31Q9BXU1 1019 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 RTFDC1Q9BY42 306 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-204ENST00000431283 TRIM5Q9C035 493 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 SMURF2Q9HAU4 748 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 MTMR4Q9NYA4 1195 aa5.65□□□□□ -1.5
PTPN4-204ENST00000431283 KDM6BO15054 1643 aa5.65□□□□□ -1.51
PTPN4-204ENST00000431283 ADCY10Q96PN6 1610 aa5.65□□□□□ -1.51
PTPN4-204ENST00000431283 KIF13AQ9H1H9 1805 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 ABCC2Q92887 1545 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 FAM227AF5H4B4 570 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 PYCARD-AS1I3L0S3 204 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 ADAM10O14672 748 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 TBX3O15119 743 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 RFPL1O75677 317 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 TUSC2O75896 110 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 PIAS2O75928 621 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 CD19P15391 556 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 ZKSCAN1P17029 563 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-204ENST00000431283 KLRC1P26715 233 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 PTDSS1P48651 473 aaKnown RBP5.64□□□□□ -1.51
PTPN4-204ENST00000431283 DIO1P49895 249 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 GATMP50440 423 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 ITGA8P53708 1063 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 FOXG1P55316 489 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-204ENST00000431283 SUMO3P55854 103 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-204ENST00000431283 TIRAPP58753 221 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 LARS2Q15031 903 aaKnown RBP5.64□□□□□ -1.51
PTPN4-204ENST00000431283 PPP4R4Q6NUP7 873 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 RANBP10Q6VN20 620 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 EPM2AIP1Q7L775 607 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-204ENST00000431283 OR56A3Q8NH54 315 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 MAFAQ8NHW3 353 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-204ENST00000431283 COQ8BQ96D53 544 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 CDH19Q9H159 772 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 EBF3Q9H4W6 596 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 TRIM36Q9NQ86 728 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 ZIM2Q9NZV7 527 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 TPCN1Q9ULQ1 816 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 UACAQ9BZF9 1416 aa5.64□□□□□ -1.51
PTPN4-204ENST00000431283 H7C4K7 107 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 CD3EAPO15446 510 aaKnown RBP5.63□□□□□ -1.51
PTPN4-204ENST00000431283 CBSLP0DN79 551 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 CBSP35520 551 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 PGDP52209 483 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms