RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 ZSWIM6Q9HCJ5 1215 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 PXMP2Q9NR77 195 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 CDH7Q9ULB5 785 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 SLC27A5Q9Y2P5 690 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 TRIM49BA6NDI0 452 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 KLHL38Q2WGJ6 581 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 P3H1Q32P28 736 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 CBWD3Q5JTY5 395 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 CBWD5Q5RIA9 395 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 HMGB4Q8WW32 186 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 SYT15Q9BQS2 421 aa13.78□□□□□ -0.2
CDK12-201ENST00000430627 TPX2Q9ULW0 747 aaKnown RBP13.78□□□□□ -0.2
CDK12-201ENST00000430627 SF3B1O75533 1304 aaKnown RBP eCLIP13.78□□□□□ -0.25e-9■■■■■ 39.2
CDK12-201ENST00000430627 RNF103-CHMP3A0A140T963 221 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 HLA-DRAP01903 254 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 LAG3P18627 525 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 RENBPP51606 427 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 NOMO2Q5JPE7 1267 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 GRAMD4Q6IC98 578 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 MPZL3Q6UWV2 235 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 TRAPPC12Q8WVT3 735 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 GID8Q9NWU2 228 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.2
CDK12-201ENST00000430627 TBL1XO60907 577 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 MCF2P10911 925 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 CNPY3Q9BT09 278 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 FTHL17Q9BXU8 183 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 HAUS4Q9H6D7 363 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 CLIC5Q9NZA1 410 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 STOML1Q9UBI4 398 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 ERVK-11Q9UQG0 969 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 SIK3Q9Y2K2 1263 aa13.77□□□□□ -0.2
CDK12-201ENST00000430627 CPSF1Q10570 1443 aaKnown RBP13.77□□□□□ -0.21
CDK12-201ENST00000430627 CCNB2O95067 398 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 ESRRAP11474 423 aaPredicted RBP13.77□□□□□ -0.21
CDK12-201ENST00000430627 FEN1P39748 380 aaKnown RBP13.77□□□□□ -0.21
CDK12-201ENST00000430627 MRPS6P82932 125 aaKnown RBP13.77□□□□□ -0.21
CDK12-201ENST00000430627 TRIP4Q15650 581 aaPredicted RBP13.77□□□□□ -0.21
CDK12-201ENST00000430627 NEK7Q8TDX7 302 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 PCDHGB3Q9Y5G1 929 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 KLHL18O94889 574 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 PLGP00747 810 aaPredicted RBP13.77□□□□□ -0.21
CDK12-201ENST00000430627 SCNN1GP51170 649 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 TKTL1P51854 596 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 SPIDRQ14159 915 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 KBTBD12Q3ZCT8 623 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 ZNF544Q6NX49 715 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 OR2W6PQ8NHA6 318 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 CCT7Q99832 543 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 V9GYQ6 96 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 LAMTOR5O43504 91 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 SLFN14P0C7P3 912 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 CCL5P13501 91 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 CYP2A7P20853 494 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 GABRR2P28476 465 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 PKN2Q16513 984 aaKnown RBP13.77□□□□□ -0.21
CDK12-201ENST00000430627 GALNTL6Q49A17 601 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 MTHFD1LQ6UB35 978 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 LPPQ93052 612 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 PHACTR1Q9C0D0 580 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 NUDT5Q9UKK9 219 aa13.77□□□□□ -0.21
CDK12-201ENST00000430627 PDE2AO00408 941 aaPredicted RBP13.76□□□□□ -0.21
CDK12-201ENST00000430627 CNPP09543 421 aaKnown RBP13.76□□□□□ -0.21
CDK12-201ENST00000430627 CASRP41180 1078 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 GEMP55040 296 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 ABCE1P61221 599 aaKnown RBP13.76□□□□□ -0.21
CDK12-201ENST00000430627 SLC39A14Q15043 492 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 LPAL2Q16609 132 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 C1orf54Q8WWF1 131 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 KCNN2Q9H2S1 579 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 KIF24Q5T7B8 1368 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 SLC15A5A6NIM6 579 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 SLC25A12O75746 678 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 SOAT2O75908 522 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 CD52P31358 61 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 ARSEP51690 589 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 ZNHIT3Q15649 155 aaPredicted RBP13.76□□□□□ -0.21
CDK12-201ENST00000430627 GRAMD1BQ3KR37 738 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 ATAD3BQ5T9A4 648 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 ATP6V1C2Q8NEY4 427 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 OR8D1Q8WZ84 308 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 GOLGA8KD6RF30 607 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 WNT10BO00744 389 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 HERVK_113Q902F9 699 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 FOXP3Q9BZS1 431 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 MTMR12Q9C0I1 747 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 SLC32A1Q9H598 525 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 IL1RL2Q9HB29 575 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 KRT84Q9NSB2 600 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 VPS9D1Q9Y2B5 631 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 RBM7Q9Y580 266 aaKnown RBP13.76□□□□□ -0.21
CDK12-201ENST00000430627 RASSF10A6NK89 507 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 HIST1H2ABP04908 130 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 UQCRBP14927 111 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 SF3B3Q15393 1217 aaKnown RBP13.76□□□□□ -0.21
CDK12-201ENST00000430627 HIST3H2AQ7L7L0 130 aa13.76□□□□□ -0.21
CDK12-201ENST00000430627 HIST1H2ACQ93077 130 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms