RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 ATXN1P54253 815 aaKnown RBP16.92■□□□□ 0.3
MBD4-203ENST00000429544 MTM1Q13496 603 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 PPP6R3Q5H9R7 873 aaPredicted RBP16.92■□□□□ 0.3
MBD4-203ENST00000429544 RNF187Q5TA31 235 aaPredicted RBP16.92■□□□□ 0.3
MBD4-203ENST00000429544 GKAP1Q5VSY0 366 aaPredicted RBP16.92■□□□□ 0.3
MBD4-203ENST00000429544 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 SLC26A9Q7LBE3 791 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 TAX1BP1Q86VP1 789 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 PLD5Q8N7P1 536 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 TBCBQ99426 244 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 ADAM33Q9BZ11 813 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 ZFYVE28Q9HCC9 887 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 XPO7Q9UIA9 1087 aaKnown RBP16.92■□□□□ 0.3
MBD4-203ENST00000429544 HEY1Q9Y5J3 304 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 CDY2AQ9Y6F7 541 aa16.92■□□□□ 0.3
MBD4-203ENST00000429544 CLUHO75153 1309 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 VIMP08670 466 aaKnown RBP16.91■□□□□ 0.3
MBD4-203ENST00000429544 PTPN9P43378 593 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 GPX6P59796 221 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 MRPS6P82932 125 aaKnown RBP16.91■□□□□ 0.3
MBD4-203ENST00000429544 MPP2Q14168 576 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 C6orf89Q6UWU4 347 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 LIMS2Q7Z4I7 341 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 OTUD6BQ8N6M0 293 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 PCDH19Q8TAB3 1148 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 MRRFQ96E11 262 aaKnown RBP16.91■□□□□ 0.3
MBD4-203ENST00000429544 CACNG4Q9UBN1 327 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 MEIS3P2A8K0S8 358 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 RASA4BC9J798 803 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 MDM4O15151 490 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 RASA4O43374 803 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 ATP2C2O75185 946 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 MAP3K6O95382 1288 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 ACAT1P24752 427 aaKnown RBP16.91■□□□□ 0.3
MBD4-203ENST00000429544 MAGEA9P43362 315 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 LIG3P49916 1009 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 CRHR2Q13324 411 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 TAF2Q6P1X5 1199 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 B3GALNT2Q8NCR0 500 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 PYROXD1Q8WU10 500 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 MAML1Q92585 1016 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 CABS1Q96KC9 395 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 TNIP3Q96KP6 325 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 DNAI2Q9GZS0 605 aa16.91■□□□□ 0.3
MBD4-203ENST00000429544 M0QZ92 97 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 DUSP11O75319 330 aaKnown RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 TGM2P21980 687 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 WARSP23381 471 aaKnown RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 IGFBP6P24592 240 aaPredicted RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 ACADSBP45954 432 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 BCAR1P56945 870 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 SF3A3Q12874 501 aaKnown RBP eCLIP16.9■□□□□ 0.3
MBD4-203ENST00000429544 BBS9Q3SYG4 887 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 GNASQ5JWF2 1037 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 SYCP2LQ5T4T6 812 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 TADA2BQ86TJ2 420 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 GDAP1Q8TB36 358 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 WDR83Q9BRX9 315 aaKnown RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 UBN1Q9NPG3 1134 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 SCN10AQ9Y5Y9 1956 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 CLDN5O00501 218 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 CYB561D2O14569 222 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 KCNN4O15554 427 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 CTSHP09668 335 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 RARBP10826 455 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 STIP1P31948 543 aaKnown RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 RPL34P49207 117 aaKnown RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 SLC9A4Q6AI14 798 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 CXCL17Q6UXB2 119 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 SAPCD2Q86UD0 394 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 TDRPQ86YL5 185 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 TOP6BLQ8N6T0 577 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 PPP1R10Q96QC0 940 aaKnown RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 NCAPGQ9BPX3 1015 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 ZNF670Q9BS34 389 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 MTG1Q9BT17 334 aaPredicted RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 C11orf84Q9BUA3 381 aaPredicted RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 MAGEB5Q9BZ81 275 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 PHACTR1Q9C0D0 580 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 RASSF4Q9H2L5 321 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 DHX35Q9H5Z1 703 aaKnown RBP16.9■□□□□ 0.3
MBD4-203ENST00000429544 CYLDQ9NQC7 956 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 TRPV2Q9Y5S1 764 aa16.9■□□□□ 0.3
MBD4-203ENST00000429544 SLC10A3P09131 477 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 CYP2F1P24903 491 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 LRPAP1P30533 357 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 SSTR1P30872 391 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 SCNN1AP37088 669 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 RNASELQ05823 741 aaKnown RBP16.89■□□□□ 0.29
MBD4-203ENST00000429544 NBPF20Q3BBV1 942 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 ATP11CQ8NB49 1132 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 FBXO36Q8NEA4 188 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 LRRN4Q8WUT4 740 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 NDRG1Q92597 394 aaKnown RBP16.89■□□□□ 0.29
MBD4-203ENST00000429544 USP29Q9HBJ7 922 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 ACTL7BQ9Y614 415 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 E7ESA3 106 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 PGK1P00558 417 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 ADIGQ0VDE8 80 aa16.89■□□□□ 0.29
MBD4-203ENST00000429544 EFTUD2Q15029 972 aaKnown RBP eCLIP16.89■□□□□ 0.292e-13■□□□□ 11.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms