RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 INO80B-WBP1J3KQ70 363 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 NRP1O14786 923 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 EZRP15311 586 aaKnown RBP10.04□□□□□ -0.8
NEDD1-203ENST00000429527 TSHRP16473 764 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 GNAZP19086 355 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 TNFAIP3P21580 790 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 FGFR3P22607 806 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 COPS2P61201 443 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 CDR2Q01850 454 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 GCNT1Q02742 428 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 PAN2Q504Q3 1202 aaKnown RBP10.04□□□□□ -0.8
NEDD1-203ENST00000429527 HS2ST1Q7LGA3 356 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 CPLX4Q7Z7G2 160 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 ZNF280BQ86YH2 543 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 THNSL1Q8IYQ7 743 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 SPATA18Q8TC71 538 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 MAML1Q92585 1016 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 KRT35Q92764 455 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 CPB2Q96IY4 423 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 PPP1R16BQ96T49 567 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 ADPGKQ9BRR6 497 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 KCNH6Q9H252 994 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 NXF3Q9H4D5 531 aaKnown RBP10.04□□□□□ -0.8
NEDD1-203ENST00000429527 ALG13Q9NP73 1137 aaKnown RBP10.04□□□□□ -0.8
NEDD1-203ENST00000429527 KMT5AQ9NQR1 393 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 MTUS1Q9ULD2 1270 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 AGAP1Q9UPQ3 857 aa10.04□□□□□ -0.8
NEDD1-203ENST00000429527 LRRIQ4A6NIV6 560 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 DLL1O00548 723 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 RASGRF2O14827 1237 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 HNRNPCL1O60812 293 aaKnown RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 ALDH2P05091 517 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 KLRC2P26717 231 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 ALDH7A1P49419 539 aaKnown RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 CLCN4P51793 760 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 IFI35P80217 286 aaPredicted RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 MRPL58Q14197 206 aaKnown RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 SEL1L2Q5TEA6 688 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 KIAA1841Q6NSI8 718 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 LILRA6Q6PI73 481 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 GRK7Q8WTQ7 553 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 LPPQ93052 612 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 TRIM11Q96F44 468 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 KLHL5Q96PQ7 755 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 RNF39Q9H2S5 420 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 SLC38A7Q9NVC3 462 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 SAMD15Q9P1V8 674 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 LARSQ9P2J5 1176 aaKnown RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 LNPEPQ9UIQ6 1025 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 TTLL13PA6NNM8 815 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 PSTPIP1O43586 416 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 CYP1A1P04798 512 aaPredicted RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 PYGMP11217 842 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 COMTP21964 271 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 C11orf91Q3C1V1 193 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 RNF187Q5TA31 235 aaPredicted RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 DCLRE1AQ6PJP8 1040 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 SNF8Q96H20 258 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 UHRF1Q96T88 793 aaPredicted RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 DHRS4Q9BTZ2 278 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 HCSTQ9UBK5 93 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 DPP7Q9UHL4 492 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 GINS2Q9Y248 185 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 LRRC42Q9Y546 428 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 K7ERI5 159 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 FAM13AO94988 1023 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 RDXP35241 583 aaKnown RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 VAMP7P51809 220 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 RWDD2BP57060 319 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 STAT4Q14765 748 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 DCAF17Q5H9S7 520 aaPredicted RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 EEF1DP3Q658K8 133 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 ACAD10Q6JQN1 1059 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 SYCE2Q6PIF2 218 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 ARHGEF19Q8IW93 802 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 PLEKHO2Q8TD55 490 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 KREMEN1Q96MU8 473 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 TCF25Q9BQ70 676 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 CDC42EP4Q9H3Q1 356 aaKnown RBP10.03□□□□□ -0.8
NEDD1-203ENST00000429527 SENP1Q9P0U3 644 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 HSFX1Q9UBD0 423 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 TRIP11Q15643 1979 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 CHD7Q9P2D1 2997 aa10.03□□□□□ -0.8
NEDD1-203ENST00000429527 CCDC189A1A4V9 331 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 ANKRD63C9JTQ0 380 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 FTLP02792 175 aaPredicted RBP10.02□□□□□ -0.81
NEDD1-203ENST00000429527 CACNB1Q02641 598 aaPredicted RBP10.02□□□□□ -0.81
NEDD1-203ENST00000429527 ARID5AQ03989 594 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 PTCRAQ6ISU1 281 aaPredicted RBP10.02□□□□□ -0.81
NEDD1-203ENST00000429527 HIBCHQ6NVY1 386 aaPredicted RBP10.02□□□□□ -0.81
NEDD1-203ENST00000429527 KATNAL2Q8IYT4 538 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 CCDC63Q8NA47 563 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 MDM1Q8TC05 714 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 EMILIN2Q9BXX0 1053 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 DNAJB4Q9UDY4 337 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 TBX20Q9UMR3 447 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 A0A0B4J269 797 aa10.02□□□□□ -0.81
NEDD1-203ENST00000429527 A6NHS1 94 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms