RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TLL2Q9Y6L7 1015 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 CLUHO75153 1309 aa14.27□□□□□ -0.12
THBS3-202ENST00000428962 PDCD11Q14690 1871 aaKnown RBP14.27□□□□□ -0.13
THBS3-202ENST00000428962 FOXO6A8MYZ6 492 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 DNM1LO00429 736 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 PPEF2O14830 753 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 TMEM63AO94886 807 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 ZFXP17010 805 aaPredicted RBP14.27□□□□□ -0.13
THBS3-202ENST00000428962 BCAR1P56945 870 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 PKN2Q16513 984 aaKnown RBP14.27□□□□□ -0.13
THBS3-202ENST00000428962 BBS9Q3SYG4 887 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 FBXW10Q5XX13 1052 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 ZC3H18Q86VM9 953 aaKnown RBP14.27□□□□□ -0.13
THBS3-202ENST00000428962 C18orf25Q96B23 403 aaPredicted RBP14.27□□□□□ -0.13
THBS3-202ENST00000428962 RTP4Q96DX8 246 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 SNX25Q9H3E2 840 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 PCDH18Q9HCL0 1135 aa14.27□□□□□ -0.13
THBS3-202ENST00000428962 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
THBS3-202ENST00000428962 PAPSS1O43252 624 aaPredicted RBP14.26□□□□□ -0.13
THBS3-202ENST00000428962 ADCY6O43306 1168 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 ZBED1O96006 694 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 CPT1AP50416 773 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 SOWAHAQ2M3V2 549 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 SV2CQ496J9 727 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 ZC3H12AQ5D1E8 599 aaKnown RBP14.26□□□□□ -0.13
THBS3-202ENST00000428962 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 SLC9A4Q6AI14 798 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 C1orf228Q6PIY5 440 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 NPNTQ6UXI9 565 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 C3orf62Q6ZUJ4 267 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 SLC26A9Q7LBE3 791 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 CDKL3Q8IVW4 592 aaPredicted RBP14.26□□□□□ -0.13
THBS3-202ENST00000428962 CRYBG2Q8N1P7 616 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 PLD5Q8N7P1 536 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 ANKRD52Q8NB46 1076 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 FAF2Q96CS3 445 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 DHRS4Q9BTZ2 278 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 SNRNP25Q9BV90 132 aaKnown RBP14.26□□□□□ -0.13
THBS3-202ENST00000428962 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 GDAP2Q9NXN4 497 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 SLC12A4Q9UP95 1085 aa14.26□□□□□ -0.13
THBS3-202ENST00000428962 PIN4Q9Y237 131 aaKnown RBP14.26□□□□□ -0.13
THBS3-202ENST00000428962 BCLAF3A2AJT9 711 aaKnown RBP14.25□□□□□ -0.13
THBS3-202ENST00000428962 KPNA7A9QM74 516 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 PIRO00625 290 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 BANF1O75531 89 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 ZWINTO95229 277 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 ASMTLO95671 621 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 KCNE1P15382 129 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 SCN1AP35498 2009 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 MSH2P43246 934 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 PSEN2P49810 448 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 TAF6P49848 677 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 MAP2K5Q13163 448 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 CBLBQ13191 982 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 KCNJ11Q14654 390 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 MTFR1Q15390 333 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 ZKSCAN8Q15776 578 aaPredicted RBP14.25□□□□□ -0.13
THBS3-202ENST00000428962 MSS51Q4VC12 460 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 ADGRD1Q6QNK2 874 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 RGS9BPQ6ZS82 235 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 SAPCD2Q86UD0 394 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 SCUBE3Q8IX30 993 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 APPL2Q8NEU8 664 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 FBF1Q8TES7 1133 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 ALKBH8Q96BT7 664 aaKnown RBP14.25□□□□□ -0.13
THBS3-202ENST00000428962 CYTH2Q99418 400 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 PAFAH2Q99487 392 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 APOL6Q9BWW8 343 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 KLC2Q9H0B6 622 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 CDHR5Q9HBB8 845 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 HES2Q9Y543 173 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 KCNN4O15554 427 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 ATP2C2O75185 946 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 SPAG7O75391 227 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 TAC1P20366 129 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 CA4P22748 312 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 SSTR1P30872 391 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
THBS3-202ENST00000428962 RPL34P49207 117 aaKnown RBP14.25□□□□□ -0.13
THBS3-202ENST00000428962 GAD2Q05329 585 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 ADCY1Q08828 1119 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 SNX17Q15036 470 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 MORN1Q5T089 497 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 PAXIP1Q6ZW49 1069 aaPredicted RBP14.25□□□□□ -0.13
THBS3-202ENST00000428962 DENND1AQ8TEH3 1009 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 TNIP3Q96KP6 325 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 HSFY1Q96LI6 401 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 PAIP2Q9BPZ3 127 aaKnown RBP14.25□□□□□ -0.13
THBS3-202ENST00000428962 PITPNM3Q9BZ71 974 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 CXCL16Q9H2A7 254 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 SLC40A1Q9NP59 571 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 HAUS2Q9NVX0 235 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 IKBKGQ9Y6K9 419 aa14.25□□□□□ -0.13
THBS3-202ENST00000428962 TRIP11Q15643 1979 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 SMIM28A0A1B0GU29 152 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 TCRBV7S3A2A0A539 114 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 AKAP5P24588 427 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 ADORA2BP29275 332 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms