RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 KCNV2Q8TDN2 545 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 HERVK_113Q902F9 699 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 SEMA4DQ92854 862 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 PPP2R3CQ969Q6 453 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 UTP4Q969X6 686 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 AGAP3Q96P47 875 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 FAM193BQ96PV7 902 aaPredicted RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 PAAF1Q9BRP4 392 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 ZBED2Q9BTP6 218 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 LSM14BQ9BX40 385 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 NEUROG2Q9H2A3 272 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 DPH5Q9H2P9 285 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 PABPC3Q9H361 631 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 SLC38A7Q9NVC3 462 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 TBC1D30Q9Y2I9 924 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 SIK3Q9Y2K2 1263 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 TSC2P49815 1807 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 B4GALT3O60512 393 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 ZC3H11AO75152 810 aaKnown RBP eCLIP11.94□□□□□ -0.5
CECR3-201ENST00000428828 E2F6O75461 281 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 PALMO75781 387 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 DGKIO75912 1065 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 DDHD2O94830 711 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 AP3M2P53677 418 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 DRG2P55039 364 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 MYL6P60660 151 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 ZBTB6Q15916 424 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 MUM1Q2TAK8 710 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 EPC2Q52LR7 807 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 SPOPLQ6IQ16 392 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 RASGEF1CQ8N431 466 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 KIF2BQ8N4N8 673 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 FITM2Q8N6M3 262 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 HASPINQ8TF76 798 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 CCDC97Q96F63 343 aaPredicted RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 SMC6Q96SB8 1091 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 YME1L1Q96TA2 773 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 NAP1L3Q99457 506 aaPredicted RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 PRMT1Q99873 361 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 SPATA16Q9BXB7 569 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 INTS2Q9H0H0 1204 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 MTIF3Q9H2K0 278 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 TLE6Q9H808 572 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 FAM207AQ9NSI2 230 aaPredicted RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 DNAJB4Q9UDY4 337 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 SIX4Q9UIU6 781 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 ITGA11Q9UKX5 1188 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 PGRMC1O00264 195 aaKnown RBP11.93□□□□□ -0.5
CECR3-201ENST00000428828 PLEKP08567 350 aaPredicted RBP11.93□□□□□ -0.5
CECR3-201ENST00000428828 PBX3P40426 434 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 RASSF2P50749 326 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 CLCNKBP51801 687 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 CACNA2D1P54289 1103 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 PHEXP78562 749 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 KCNMA1Q12791 1236 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 SHHQ15465 462 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 SPOUT1Q5T280 376 aaKnown RBP11.93□□□□□ -0.5
CECR3-201ENST00000428828 C10orf76Q5T2E6 689 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 OLFM3Q96PB7 478 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 NUDCD1Q96RS6 583 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 PCDH18Q9HCL0 1135 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 RAB20Q9NX57 234 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 DDX43Q9NXZ2 648 aaKnown RBP11.93□□□□□ -0.5
CECR3-201ENST00000428828 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
CECR3-201ENST00000428828 DAAM1Q9Y4D1 1078 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 RANBP2P49792 3224 aaKnown RBP11.93□□□□□ -0.5
CECR3-201ENST00000428828 PLXNA4Q9HCM2 1894 aa11.93□□□□□ -0.5
CECR3-201ENST00000428828 VWA8A3KMH1 1905 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 PODXLO00592 558 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 P4HA2O15460 535 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 RGS16O15492 202 aaPredicted RBP11.92□□□□□ -0.5
CECR3-201ENST00000428828 PON1P27169 355 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 OR1G1P47890 313 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 MCCD1P59942 119 aaPredicted RBP11.92□□□□□ -0.5
CECR3-201ENST00000428828 TUSC3Q13454 348 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 BTG3Q14201 252 aaPredicted RBP11.92□□□□□ -0.5
CECR3-201ENST00000428828 RPS6KA1Q15418 735 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 ZNF699Q32M78 642 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 CNPY1Q3B7I2 92 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 DAB2IPQ5VWQ8 1189 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 C9orf57Q5W0N0 161 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 GJB7Q6PEY0 223 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 SCARA5Q6ZMJ2 495 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 KLHL7Q8IXQ5 586 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 RSPH1Q8WYR4 309 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 SLC9A7Q96T83 725 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 FMO2Q99518 471 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 SELENOSQ9BQE4 189 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 MRPL9Q9BYD2 267 aaKnown RBP11.92□□□□□ -0.5
CECR3-201ENST00000428828 IMPG2Q9BZV3 1241 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 ZCWPW1Q9H0M4 648 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 CARD9Q9H257 536 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 ETNK1Q9HBU6 452 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 KANSL3Q9P2N6 904 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 SUN2Q9UH99 717 aa11.92□□□□□ -0.5
CECR3-201ENST00000428828 PRG3Q9Y2Y8 225 aaPredicted RBP11.92□□□□□ -0.5
CECR3-201ENST00000428828 UTP11Q9Y3A2 253 aaKnown RBP11.92□□□□□ -0.5
CECR3-201ENST00000428828 BZW2Q9Y6E2 419 aaKnown RBP11.92□□□□□ -0.5
CECR3-201ENST00000428828 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.92□□□□□ -0.5
CECR3-201ENST00000428828 GTPBP10A4D1E9 387 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms