RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 FAM200BP0CF97 657 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 TRIM21P19474 475 aaKnown RBP18.07■□□□□ 0.48
TRIM39-209ENST00000428728 GBP1P32455 592 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 MPLP40238 635 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 PGFP49763 221 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 TUBP50607 506 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 PPP3CAQ08209 521 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 ELF2Q15723 593 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 LY6G5CQ5SRR4 150 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 INTS8Q75QN2 995 aaKnown RBP18.07■□□□□ 0.48
TRIM39-209ENST00000428728 GPRIN1Q7Z2K8 1008 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 UNC93AQ86WB7 457 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 BBS7Q8IWZ6 715 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 WBP2Q969T9 261 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 PNKPQ96T60 521 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 SCAND2PQ9GZW5 306 aaPredicted RBP18.07■□□□□ 0.48
TRIM39-209ENST00000428728 DUSP15Q9H1R2 295 aaPredicted RBP18.07■□□□□ 0.48
TRIM39-209ENST00000428728 APOBEC3GQ9HC16 384 aaKnown RBP18.07■□□□□ 0.48
TRIM39-209ENST00000428728 ZDHHC4Q9NPG8 344 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 ARHGEF4Q9NR80 690 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 IL37Q9NZH6 218 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 EBF1Q9UH73 591 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 ATP6V1DQ9Y5K8 247 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 FOXD2O60548 495 aaPredicted RBP18.06■□□□□ 0.48
TRIM39-209ENST00000428728 TLR5O60602 858 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 KAT7O95251 611 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 ZDHHC11BP0C7U3 371 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 CD58P19256 250 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 TIE1P35590 1138 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 INCA1Q0VD86 236 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 NFIL3Q16649 462 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 PPM1JQ5JR12 505 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 SNX30Q5VWJ9 437 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 CRYBG2Q8N1P7 616 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 GUF1Q8N442 669 aaKnown RBP18.06■□□□□ 0.48
TRIM39-209ENST00000428728 ALLCQ8N6M5 410 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 ZC3H10Q96K80 434 aaKnown RBP18.06■□□□□ 0.48
TRIM39-209ENST00000428728 NIF3L1Q9GZT8 377 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 FBXO44Q9H4M3 255 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 CSNK1G1Q9HCP0 422 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 TLR8Q9NR97 1041 aaKnown RBP18.06■□□□□ 0.48
TRIM39-209ENST00000428728 RXFP3Q9NSD7 469 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 COMMD8Q9NX08 183 aa18.06■□□□□ 0.48
TRIM39-209ENST00000428728 A0A1W2PQ27 194 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 A0A1W2PQ64 194 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 A0A1W2PQD8 194 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 FAM92AA1XBS5 289 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 CYP26A1O43174 497 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 ZNF202O95125 648 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 KLF8O95600 359 aaPredicted RBP18.05■□□□□ 0.48
TRIM39-209ENST00000428728 ZNF806P0C7X5 589 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 EIF2DP41214 584 aaKnown RBP18.05■□□□□ 0.48
TRIM39-209ENST00000428728 MRPS21P82921 87 aaKnown RBP18.05■□□□□ 0.48
TRIM39-209ENST00000428728 CREB5Q02930 508 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 IL31Q6EBC2 164 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 TCEAL6Q6IPX3 200 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 CLEC20AQ6ZU45 233 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 SMYD4Q8IYR2 804 aaPredicted RBP18.05■□□□□ 0.48
TRIM39-209ENST00000428728 NAT16Q8N8M0 369 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 MDGA1Q8NFP4 955 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 TCEAL3Q969E4 200 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 OTUB2Q96DC9 234 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 CYFIP2Q96F07 1278 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 EEF2KMTQ96G04 330 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 NT5C1AQ9BXI3 368 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 PCDHGA5Q9Y5G8 931 aa18.05■□□□□ 0.48
TRIM39-209ENST00000428728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.04■□□□□ 0.48
TRIM39-209ENST00000428728 RHOBTB1O94844 696 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 HNRNPLP14866 589 aaKnown RBP eCLIP18.04■□□□□ 0.48
TRIM39-209ENST00000428728 RPL13P26373 211 aaKnown RBP18.04■□□□□ 0.48
TRIM39-209ENST00000428728 PSMC2P35998 433 aaKnown RBP18.04■□□□□ 0.48
TRIM39-209ENST00000428728 GAD2Q05329 585 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 ADAM9Q13443 819 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 CRY1Q16526 586 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 ANO4Q32M45 955 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 PLA2G2CQ5R387 149 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 EMC10Q5UCC4 262 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 BTBD8Q5XKL5 378 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 TMEM92Q6UXU6 159 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 IL17RCQ8NAC3 791 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 TXNDC5Q8NBS9 432 aaKnown RBP18.04■□□□□ 0.48
TRIM39-209ENST00000428728 CCDC150Q8NCX0 1101 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 CNOT6LQ96LI5 555 aaKnown RBP18.04■□□□□ 0.48
TRIM39-209ENST00000428728 HNRNPABQ99729 332 aaKnown RBP18.04■□□□□ 0.48
TRIM39-209ENST00000428728 CYP3A43Q9HB55 503 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 SPHK2Q9NRA0 654 aa18.04■□□□□ 0.48
TRIM39-209ENST00000428728 CIZ1Q9ULV3 898 aaPredicted RBP18.04■□□□□ 0.48
TRIM39-209ENST00000428728 HHLA1C9JL84 531 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 SGK1O00141 431 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 CILPO75339 1184 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 TBX18O95935 607 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 ACO1P21399 889 aaKnown RBP18.03■□□□□ 0.48
TRIM39-209ENST00000428728 BCKDHBP21953 392 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 GRIA2P42262 883 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 ZCWPW2Q504Y3 356 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 ZNF394Q53GI3 561 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 USP39Q53GS9 565 aaKnown RBP18.03■□□□□ 0.48
TRIM39-209ENST00000428728 RASSF3Q86WH2 238 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 PHTF2Q8N3S3 785 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 TMEM8AQ9HCN3 771 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms