RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 HOXC11O43248 304 aaPredicted RBP19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 TULP3O75386 442 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 HOXB2P14652 356 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 GABRG2P18507 467 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 PDCP20941 246 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 WASP42768 502 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 ANO4Q32M45 955 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 HECTD3Q5T447 861 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 NUDT18Q6ZVK8 323 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 OVCA2Q8WZ82 227 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 CCDC127Q96BQ5 260 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 CALCOCO1Q9P1Z2 691 aa19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 NXF1Q9UBU9 619 aaKnown RBP19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 CHORDC1Q9UHD1 332 aaPredicted RBP19.44■□□□□ 0.7
UPK3BP1-201ENST00000428678 OPHN1O60890 802 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 CLSTN1O94985 981 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 SERPINF2P08697 491 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 FAM163BP0C2L3 166 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 IRF1P10914 325 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 RDXP35241 583 aaKnown RBP19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 HOXD13P35453 343 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 CYP2J2P51589 502 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 TRPC3Q13507 836 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 TMEM25Q86YD3 366 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 BBS7Q8IWZ6 715 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 TERB1Q8NA31 727 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 SCAMP5Q8TAC9 235 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 KCNV2Q8TDN2 545 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 MED10Q9BTT4 135 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 NACA2Q9H009 215 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 CCSER2Q9H7U1 834 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 UPF2Q9HAU5 1272 aaKnown RBP19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 SPHK2Q9NRA0 654 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 AGPAT3Q9NRZ7 376 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 ATP8B3O60423 1300 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 LAMA5O15230 3695 aa19.43■□□□□ 0.7
UPK3BP1-201ENST00000428678 ZBTB24O43167 697 aaPredicted RBP19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 NTSR1P30989 418 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 MYL6P60660 151 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 ZNF33AQ06730 810 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 CYP24A1Q07973 514 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 PSMD6Q15008 389 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 RABEPKQ7Z6M1 372 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 MINDY1Q8N5J2 469 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 OR2I1PQ8NGU4 316 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 ERLEC1Q96DZ1 483 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 KCNK16Q96T55 309 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 CAPN10Q9HC96 672 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 GMIPQ9P107 970 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 LHX6Q9UPM6 363 aa19.42■□□□□ 0.7
UPK3BP1-201ENST00000428678 MYH10P35580 1976 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 PCDH15Q96QU1 1955 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 IGHV1OR15-9A0A0B4J2B8 117 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 H0Y626 953 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 TRIM24O15164 1050 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 CLIC2O15247 247 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 EIF3DO15371 548 aaKnown RBP eCLIP19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 TRIM16O95361 564 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 SLC5A3P53794 718 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 FAM193AP78312 1265 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 ASIC1P78348 528 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 RING1Q06587 406 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 EGFLAMQ63HQ2 1017 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 GRAMD4Q6IC98 578 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 FAM35AQ86V20 835 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 MIB1Q86YT6 1006 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 CHCHD4Q8N4Q1 142 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 WBP2Q969T9 261 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 LRRC27Q9C0I9 530 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 TNMDQ9H2S6 317 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 SMYD3Q9H7B4 428 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 DMAP1Q9NPF5 467 aaPredicted RBP19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 DNAJC17Q9NVM6 304 aaKnown RBP19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 CYP8B1Q9UNU6 501 aa19.41■□□□□ 0.7
UPK3BP1-201ENST00000428678 ARHGAP33O14559 1287 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 PHACTR2O75167 634 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 TUBP50607 506 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 SLC39A14Q15043 492 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 SDE2Q6IQ49 451 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 LRSAM1Q6UWE0 723 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 NELFCDQ8IXH7 590 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 CHPFQ8IZ52 775 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 XXYLT1Q8NBI6 393 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 SYAP1Q96A49 352 aaPredicted RBP19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 HSPA12BQ96MM6 686 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 USP28Q96RU2 1077 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 TRIM9Q9C026 710 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 HCN2Q9UL51 889 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 ACACAQ13085 2346 aa19.4■□□□□ 0.7
UPK3BP1-201ENST00000428678 A0A1W2PQF6 199 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 NEDD8-MDP1E9PL57 170 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 TGFB1I1O43294 461 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 ZNF217O75362 1048 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 AP1G2O75843 785 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 STAU1O95793 577 aaKnown RBP19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 SYPP08247 313 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 NDUFV2P19404 249 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 ATICP31939 592 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 CDH8P55286 799 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 FAM26FQ5R3K3 315 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms