RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 EXOC3O60645 756 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 CUTAO60888 179 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 VNN1O95497 513 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 TBX18O95935 607 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 ADH1CP00326 375 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 FAM163BP0C2L3 166 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 CCDC130P13994 396 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 DLG4P78352 724 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 BIRC3Q13489 604 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 ANO4Q32M45 955 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 EOGTQ5NDL2 527 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 KIAA1211LQ6NV74 962 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 CNNM4Q6P4Q7 775 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 LPCAT2Q7L5N7 544 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 ZMIZ2Q8NF64 920 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 SYAP1Q96A49 352 aaPredicted RBP17.55■□□□□ 0.4
VARS-216ENST00000428445 POLMQ9NP87 494 aaPredicted RBP17.55■□□□□ 0.4
VARS-216ENST00000428445 HMGXB4Q9UGU5 601 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 WASF3Q9UPY6 502 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 SH3BP1Q9Y3L3 701 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 CEP295Q9C0D2 2601 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 CHD6Q8TD26 2715 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 TULP3O75386 442 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 AP1G2O75843 785 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 RTN3O95197 1032 aaPredicted RBP17.54■□□□□ 0.4
VARS-216ENST00000428445 STAU1O95793 577 aaKnown RBP17.54■□□□□ 0.4
VARS-216ENST00000428445 C4BPAP04003 597 aaKnown RBP17.54■□□□□ 0.4
VARS-216ENST00000428445 PROS1P07225 676 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 ITPKAP23677 461 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 ATICP31939 592 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 TNFRSF4P43489 277 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 SNRPFP62306 86 aaKnown RBP17.54■□□□□ 0.4
VARS-216ENST00000428445 GAD2Q05329 585 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 KNOP1Q1ED39 458 aaKnown RBP17.54■□□□□ 0.4
VARS-216ENST00000428445 ZNF699Q32M78 642 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 C11orf74Q86VG3 221 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 ETFBKMTQ8IXQ9 262 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 FUKQ8N0W3 1084 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 WHAMMQ8TF30 809 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 ACOX2Q99424 681 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 SMOQ99835 787 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 IL37Q9NZH6 218 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 TBC1D14Q9P2M4 693 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 WDFY3Q8IZQ1 3526 aa17.54■□□□□ 0.4
VARS-216ENST00000428445 PCNX2A6NKB5 2137 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 ENGP17813 658 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 GABRG2P18507 467 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 EIF2DP41214 584 aaKnown RBP17.53■□□□□ 0.4
VARS-216ENST00000428445 MAP3K7CLP57077 242 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 NCOA4Q13772 614 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 ZNF667Q5HYK9 610 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 C10orf76Q5T2E6 689 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 SPOPLQ6IQ16 392 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 UNQ6494/PRO21346Q6UXR6 183 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 DDX42Q86XP3 938 aaKnown RBP eCLIP17.53■□□□□ 0.4
VARS-216ENST00000428445 ZNF513Q8N8E2 541 aaPredicted RBP17.53■□□□□ 0.4
VARS-216ENST00000428445 C12orf29Q8N999 325 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 PARD3BQ8TEW8 1205 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 JAKMIP2Q96AA8 810 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 ZNF396Q96N95 335 aaPredicted RBP17.53■□□□□ 0.4
VARS-216ENST00000428445 CD93Q9NPY3 652 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 SPHK2Q9NRA0 654 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 KRT82Q9NSB4 513 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 NUDT5Q9UKK9 219 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 ZMIZ1Q9ULJ6 1067 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 AKAP13Q12802 2813 aa17.53■□□□□ 0.4
VARS-216ENST00000428445 UBE4BO95155 1302 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 K7ELQ4 463 aaPredicted RBP17.52■□□□□ 0.4
VARS-216ENST00000428445 MDM4O15151 490 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 ZDHHC11BP0C7U3 371 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 STK4Q13043 487 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 BMT2Q1RMZ1 405 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 SNX30Q5VWJ9 437 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 BTBD8Q5XKL5 378 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 EGFLAMQ63HQ2 1017 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 TPGS1Q6ZTW0 290 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 GPRIN1Q7Z2K8 1008 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 SYT12Q8IV01 421 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 C12orf56Q8IXR9 622 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 KIAA1958Q8N8K9 716 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 PDZD8Q8NEN9 1154 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 OR2I1PQ8NGU4 316 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 SLC2A14Q8TDB8 520 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 OVCA2Q8WZ82 227 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 SPACA7Q96KW9 195 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 SCNM1Q9BWG6 230 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 SLC6A17Q9H1V8 727 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 DMAP1Q9NPF5 467 aaPredicted RBP17.52■□□□□ 0.4
VARS-216ENST00000428445 FAM49BQ9NUQ9 324 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 OSER1Q9NX31 292 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 DEC1Q9P2X7 70 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 SERTAD1Q9UHV2 236 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 PCDHA7Q9UN72 937 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 PLXND1Q9Y4D7 1925 aa17.52■□□□□ 0.4
VARS-216ENST00000428445 SPAARA0A1B0GVQ0 90 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.51■□□□□ 0.39
VARS-216ENST00000428445 HOXC11O43248 304 aaPredicted RBP17.51■□□□□ 0.39
VARS-216ENST00000428445 KLRC4O43908 158 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 GREM1O60565 184 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 YEATS4O95619 227 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms