RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 CETN3O15182 167 aa28.78■■■□□ 2.2
LMO1-202ENST00000428101 SEC13P55735 322 aa28.78■■■□□ 2.2
LMO1-202ENST00000428101 COBLL1Q53SF7 1204 aa28.78■■■□□ 2.2
LMO1-202ENST00000428101 ZNF658Q5TYW1 1059 aaPredicted RBP28.78■■■□□ 2.2
LMO1-202ENST00000428101 KBTBD6Q86V97 674 aa28.78■■■□□ 2.2
LMO1-202ENST00000428101 SFTPA1Q8IWL2 248 aa28.78■■■□□ 2.2
LMO1-202ENST00000428101 CCDC26Q8TAB7 109 aa28.78■■■□□ 2.2
LMO1-202ENST00000428101 GSDMAQ96QA5 445 aa28.78■■■□□ 2.2
LMO1-202ENST00000428101 SCML2Q9UQR0 700 aa28.78■■■□□ 2.2
LMO1-202ENST00000428101 AXIN1O15169 862 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 TLR5O60602 858 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 ADH1CP00326 375 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 TRIM21P19474 475 aaKnown RBP28.77■■■□□ 2.2
LMO1-202ENST00000428101 ATXN1P54253 815 aaKnown RBP28.77■■■□□ 2.2
LMO1-202ENST00000428101 NUCB2P80303 420 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 CSRP2Q16527 193 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 C2orf27AQ580R0 203 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 CACNA2D4Q7Z3S7 1137 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 CCDC150Q8NCX0 1101 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 SPATA20Q8TB22 786 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 ERCC4Q92889 916 aaPredicted RBP28.77■■■□□ 2.2
LMO1-202ENST00000428101 OTUB2Q96DC9 234 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 DUSP9Q99956 384 aaKnown RBP28.77■■■□□ 2.2
LMO1-202ENST00000428101 TLR8Q9NR97 1041 aaKnown RBP28.77■■■□□ 2.2
LMO1-202ENST00000428101 OSER1Q9NX31 292 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 EBF1Q9UH73 591 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 SH3BP1Q9Y3L3 701 aa28.77■■■□□ 2.2
LMO1-202ENST00000428101 MYO18AQ92614 2054 aaKnown RBP28.77■■■□□ 2.2
LMO1-202ENST00000428101 GOLGA6L4A6NEF3 574 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 APBB3O95704 486 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 TBX18O95935 607 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 CCDC192P0DO97 292 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 EPB41P11171 864 aaKnown RBP28.76■■■□□ 2.19
LMO1-202ENST00000428101 CHRM1P11229 460 aaPredicted RBP28.76■■■□□ 2.19
LMO1-202ENST00000428101 ADH5P11766 374 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 SDHBP21912 280 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 EIF2DP41214 584 aaKnown RBP28.76■■■□□ 2.19
LMO1-202ENST00000428101 LY6G5CQ5SRR4 150 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 BBS7Q8IWZ6 715 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 ZC3H3Q8IXZ2 948 aaKnown RBP28.76■■■□□ 2.19
LMO1-202ENST00000428101 FBXL13Q8NEE6 735 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 JAKMIP2Q96AA8 810 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 FAXDC2Q96IV6 333 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 PNKPQ96T60 521 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 PNPLA8Q9NP80 782 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 RAB20Q9NX57 234 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 PCDHA5Q9Y5H7 936 aa28.76■■■□□ 2.19
LMO1-202ENST00000428101 A0A0A0MRY4 1105 aa28.75■■■□□ 2.19
LMO1-202ENST00000428101 MED19A0JLT2 244 aaPredicted RBP28.75■■■□□ 2.19
LMO1-202ENST00000428101 CYP26A1O43174 497 aa28.75■■■□□ 2.19
LMO1-202ENST00000428101 MXI1P50539 228 aa28.75■■■□□ 2.19
LMO1-202ENST00000428101 PMS1P54277 932 aaKnown RBP28.75■■■□□ 2.19
LMO1-202ENST00000428101 ZNF394Q53GI3 561 aa28.75■■■□□ 2.19
LMO1-202ENST00000428101 PPP1R26Q5T8A7 1209 aaPredicted RBP28.75■■■□□ 2.19
LMO1-202ENST00000428101 ANKRD40Q6AI12 368 aa28.75■■■□□ 2.19
LMO1-202ENST00000428101 PRR23CQ6ZRP0 262 aa28.75■■■□□ 2.19
LMO1-202ENST00000428101 NACA2Q9H009 215 aa28.75■■■□□ 2.19
LMO1-202ENST00000428101 CYLDQ9NQC7 956 aa28.75■■■□□ 2.19
LMO1-202ENST00000428101 CDV3Q9UKY7 258 aaKnown RBP28.75■■■□□ 2.19
LMO1-202ENST00000428101 GREM1O60565 184 aa28.74■■■□□ 2.19
LMO1-202ENST00000428101 KAT7O95251 611 aa28.74■■■□□ 2.19
LMO1-202ENST00000428101 ACO1P21399 889 aaKnown RBP28.74■■■□□ 2.19
LMO1-202ENST00000428101 TATDN2Q93075 761 aa28.74■■■□□ 2.19
LMO1-202ENST00000428101 LOXL4Q96JB6 756 aa28.74■■■□□ 2.19
LMO1-202ENST00000428101 ZC3H10Q96K80 434 aaKnown RBP28.74■■■□□ 2.19
LMO1-202ENST00000428101 KLF16Q9BXK1 252 aaPredicted RBP28.74■■■□□ 2.19
LMO1-202ENST00000428101 NMUR1Q9HB89 426 aa28.74■■■□□ 2.19
LMO1-202ENST00000428101 STX10O60499 249 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 IRF1P10914 325 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 KIF11P52732 1056 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 MRPS21P82921 87 aaKnown RBP28.73■■■□□ 2.19
LMO1-202ENST00000428101 GAD2Q05329 585 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 CBWD6Q4V339 395 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 CBWD3Q5JTY5 395 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 CBWD5Q5RIA9 395 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 ETFBKMTQ8IXQ9 262 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 PHTF2Q8N3S3 785 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 CCDC33Q8N5R6 958 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 TIGD1Q96MW7 591 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 ARID3AQ99856 593 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 DUSP16Q9BY84 665 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 ARRDC1-AS1Q9H2J1 176 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 CISHQ9NSE2 258 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 MMP17Q9ULZ9 603 aa28.73■■■□□ 2.19
LMO1-202ENST00000428101 ABCA7Q8IZY2 2146 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 SLC16A3O15427 465 aaKnown RBP28.72■■■□□ 2.19
LMO1-202ENST00000428101 SMC2O95347 1197 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 APODP05090 189 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 FKBP3Q00688 224 aaKnown RBP28.72■■■□□ 2.19
LMO1-202ENST00000428101 HTR3DQ70Z44 454 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 TMEM25Q86YD3 366 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 SLC4A11Q8NBS3 891 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 TSTD1Q8NFU3 115 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 SMARCE1Q969G3 411 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 HEXIM2Q96MH2 286 aaKnown RBP28.72■■■□□ 2.19
LMO1-202ENST00000428101 TSG101Q99816 390 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 ARHGEF4Q9NR80 690 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 SPHK2Q9NRA0 654 aa28.72■■■□□ 2.19
LMO1-202ENST00000428101 A0A1W2PQH9 124 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 TRIM49BA6NDI0 452 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms