RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 TEX28O15482 410 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 SART1O43290 800 aaKnown RBP12.63□□□□□ -0.39
RFC4-206ENST00000427785 CEP104O60308 925 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 KRT1P04264 644 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 DNAJB1P25685 340 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 SLC25A11Q02978 314 aaKnown RBP12.63□□□□□ -0.39
RFC4-206ENST00000427785 MTMR3Q13615 1198 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 WHAMMP3Q1A5X7 153 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 SMTNL2Q2TAL5 461 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 TMC7Q7Z402 723 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 GIPC2Q8TF65 315 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 FAM172AQ8WUF8 416 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 SLC2A13Q96QE2 648 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 PEBP4Q96S96 227 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 TBCBQ99426 244 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 ZWILCHQ9H900 591 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.63□□□□□ -0.39
RFC4-206ENST00000427785 ASNSD1Q9NWL6 643 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.63□□□□□ -0.39
RFC4-206ENST00000427785 GMIPQ9P107 970 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 C2orf16Q68DN1 1984 aa12.63□□□□□ -0.39
RFC4-206ENST00000427785 SYNJ2BP-COX16A0A087WUM0 186 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 LILRB3O75022 631 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 CNPP09543 421 aaKnown RBP12.62□□□□□ -0.39
RFC4-206ENST00000427785 IL1R2P27930 398 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 MIPP30301 263 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 MATKP42679 507 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 PTPN9P43378 593 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 PGFP49763 221 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 ATXN1P54253 815 aaKnown RBP12.62□□□□□ -0.39
RFC4-206ENST00000427785 ERVFC1P60507 584 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 RPL10AP62906 217 aaKnown RBP12.62□□□□□ -0.39
RFC4-206ENST00000427785 YWHAZP63104 245 aaKnown RBP12.62□□□□□ -0.39
RFC4-206ENST00000427785 CREMQ03060 361 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 CKAP4Q07065 602 aaKnown RBP12.62□□□□□ -0.39
RFC4-206ENST00000427785 RAB33AQ14088 237 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 DCAF6Q58WW2 860 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 ZFYVE27Q5T4F4 411 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 CCDC181Q5TID7 509 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 SYPL2Q5VXT5 272 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 TPGS2Q68CL5 300 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 CREG2Q8IUH2 290 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 RHOT1Q8IXI2 618 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 NUP93Q8N1F7 819 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 SCML4Q8N228 414 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 MNS1Q8NEH6 495 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 POF1BQ8WVV4 589 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 IRGQQ8WZA9 623 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 EDEM1Q92611 657 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 FBXO32Q969P5 355 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 PBKQ96KB5 322 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 GDF15Q99988 308 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 DDX23Q9BUQ8 820 aaKnown RBP12.62□□□□□ -0.39
RFC4-206ENST00000427785 PLVAPQ9BX97 442 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 NKX2-4Q9H2Z4 354 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 CYP4F11Q9HBI6 524 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 POPDC2Q9HBU9 364 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 TLR9Q9NR96 1032 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 COX16Q9P0S2 106 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 FNIP2Q9P278 1114 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 STK39Q9UEW8 545 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 PCSK1NQ9UHG2 260 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 NAALADL1Q9UQQ1 740 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 LZTS1Q9Y250 596 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 PCDHA3Q9Y5H8 950 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 PCDHA11Q9Y5I1 949 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 USP3Q9Y6I4 520 aa12.62□□□□□ -0.39
RFC4-206ENST00000427785 A0A1W2PQH9 124 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 SLC38A8A6NNN8 435 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 HIDE1A8MVS5 230 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 C5orf67F2Z3F1 127 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 PI4K2BG5E9Z4 385 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 PRRG1O14668 218 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 CAPN9O14815 690 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 GRM6O15303 877 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 RNF8O76064 485 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 ABLIM3O94929 683 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 CXCL14O95715 111 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 FYNP06241 537 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 GLI1P08151 1106 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 SPATA31D3P0C874 917 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 PRLRP16471 622 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 DESP17661 470 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 PEX5P50542 639 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 HDAC4P56524 1084 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 RWDD2BP57060 319 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 YWHAGP61981 247 aaKnown RBP eCLIP12.61□□□□□ -0.39
RFC4-206ENST00000427785 C2orf54Q08AI8 447 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 TUBB2AQ13885 445 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 SMC1AQ14683 1233 aaKnown RBP12.61□□□□□ -0.39
RFC4-206ENST00000427785 LLGL1Q15334 1064 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 ATP13A4Q4VNC1 1196 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 PM20D1Q6GTS8 502 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 SPATA31D4Q6ZUB0 917 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 DENND5BQ6ZUT9 1274 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 CYP4V2Q6ZWL3 525 aaPredicted RBP12.61□□□□□ -0.39
RFC4-206ENST00000427785 ARCQ7LC44 396 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 SCD5Q86SK9 330 aa12.61□□□□□ -0.39
RFC4-206ENST00000427785 CCDC50Q8IVM0 306 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms