RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 MAPRE1Q15691 268 aaKnown RBP18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 HADHQ16836 314 aaKnown RBP18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 AAK1Q2M2I8 961 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 CCDC14Q49A88 953 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 LRRTM3Q86VH5 581 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 RBM41Q96IZ5 413 aaKnown RBP18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 TMEM175Q9BSA9 504 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 HERPUD2Q9BSE4 406 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 RC3H2Q9HBD1 1191 aaKnown RBP18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 TMLHEQ9NVH6 421 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 ADAM28Q9UKQ2 775 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 VWA8A3KMH1 1905 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 BHMG1C9JSJ3 638 aaPredicted RBP18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 PHF2O75151 1096 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 TADA2AO75478 443 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 KRT7P08729 469 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 RARAP10276 462 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 PTPN7P35236 360 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 GJC1P36383 396 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 PTPN9P43378 593 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 SLC11A1P49279 550 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 CACNA2D1P54289 1103 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 COPS2P61201 443 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 TSPY1Q01534 308 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 ADIGQ0VDE8 80 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 KLF1Q13351 362 aaPredicted RBP18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 RAB41Q5JT25 222 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 EFHC1Q5JVL4 640 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 FIBCD1Q8N539 461 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 MAIP1Q8WWC4 291 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 SLITRK1Q96PX8 696 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 TMEM209Q96SK2 561 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 C11orf84Q9BUA3 381 aaPredicted RBP18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 COLEC11Q9BWP8 271 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 MARCH5Q9NX47 278 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 TBKBP1A7MCY6 615 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 HHLA1C9JL84 531 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 KRT1P04264 644 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 ALDH2P05091 517 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 GLI1P08151 1106 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 TNFRSF8P28908 595 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 MIPP30301 263 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 ANKS1BQ7Z6G8 1248 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 C12orf50Q8NA57 414 aaPredicted RBP18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 ADAMTS19Q8TE59 1207 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 HLA-CQ95604 372 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 CFAP57Q96MR6 1250 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 OSBPL8Q9BZF1 889 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 LRRC4Q9HBW1 653 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 HCSTQ9UBK5 93 aa18.78■□□□□ 0.6
AC055811.2-201ENST00000427497 H3BNC9 293 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 ZMYND10O75800 440 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 HEXIM1O94992 359 aaKnown RBP18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 TRUB2O95900 331 aaKnown RBP18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 RALAP11233 206 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 SDC4P31431 198 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 CHRNA3P32297 505 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 C15orf59Q2T9L4 293 aaPredicted RBP18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 SH3PXD2AQ5TCZ1 1133 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 CCNI2Q6ZMN8 369 aaPredicted RBP18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 CYP4V2Q6ZWL3 525 aaPredicted RBP18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 CCDC50Q8IVM0 306 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 LRRC43Q8N309 656 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 CCDC26Q8TAB7 109 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 RNF25Q96BH1 459 aaPredicted RBP18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 ZNF689Q96CS4 500 aaPredicted RBP18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 MRPL38Q96DV4 380 aaKnown RBP18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 KCNK16Q96T55 309 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 DDX23Q9BUQ8 820 aaKnown RBP18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 GDF3Q9NR23 364 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 ZNF446Q9NWS9 450 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 AMACRQ9UHK6 382 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 USP18Q9UMW8 372 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 FAN1Q9Y2M0 1017 aa18.77■□□□□ 0.6
AC055811.2-201ENST00000427497 PATJQ8NI35 1801 aa18.77■□□□□ 0.59
AC055811.2-201ENST00000427497 C3orf70A6NLC5 250 aaPredicted RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 HSF2BPO75031 334 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 ERLIN1O75477 346 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 DGKIO75912 1065 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 FBXO21O94952 628 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 GALTP07902 379 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 LINC00271P0C7V0 271 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 BMP1P13497 986 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 CETN2P41208 172 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 KCNQ1P51787 676 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 TKTL1P51854 596 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 CDR1P51861 262 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 GPM6BQ13491 265 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 MRPL58Q14197 206 aaKnown RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 TMCO3Q6UWJ1 677 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 MFSD7Q6UXD7 560 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 SPOCD1Q6ZMY3 1216 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 MAATS1Q7Z4T9 603 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 CMASQ8NFW8 434 aaPredicted RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 RAPGEF5Q92565 580 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 CENPIQ92674 756 aaPredicted RBP18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 PEBP4Q96S96 227 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 NCAPGQ9BPX3 1015 aa18.76■□□□□ 0.59
AC055811.2-201ENST00000427497 RHOBTB2Q9BYZ6 727 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms