RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 RPL17P18621 184 aaKnown RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 SLC5A3P53794 718 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 IFRD2Q12894 506 aaPredicted RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 SLC25A52Q3SY17 297 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 MGAT5BQ3V5L5 792 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 ATP13A4Q4VNC1 1196 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 SH3PXD2AQ5TCZ1 1133 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 VPS52Q8N1B4 723 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 NUP93Q8N1F7 819 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 SCAMP5Q8TAC9 235 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 MRPL17Q9NRX2 175 aaKnown RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 SLC27A5Q9Y2P5 690 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 NLRC5Q86WI3 1866 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 FGF18O76093 207 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 TRUB2O95900 331 aaKnown RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 KRT1P04264 644 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 ROR1Q01973 937 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 SLC25A11Q02978 314 aaKnown RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 DUSP4Q13115 394 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 NAA30Q147X3 362 aaPredicted RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 BOLA3Q53S33 107 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 KCNT1Q5JUK3 1230 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 SLC13A5Q86YT5 568 aaPredicted RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 NOA1Q8NC60 698 aaKnown RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 MAIP1Q8WWC4 291 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 CLP1Q92989 425 aaKnown RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 RNF25Q96BH1 459 aaPredicted RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 SEPT5Q99719 369 aaPredicted RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 TRIM62Q9BVG3 475 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 AP1M1Q9BXS5 423 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 FBXO44Q9H4M3 255 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 RBM12Q9NTZ6 932 aaKnown RBP15.8■□□□□ 0.12
GINS3-203ENST00000426538 MTUS1Q9ULD2 1270 aa15.8■□□□□ 0.12
GINS3-203ENST00000426538 PTPRDP23468 1912 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 PTPRSQ13332 1948 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 WDR27A2RRH5 827 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 CCDC85CA6NKD9 419 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 CCDC188H7C350 402 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 TNFRSF10BO14763 440 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 NCAM1P13591 858 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 IL1R2P27930 398 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 TUFMP49411 452 aaKnown RBP15.79■□□□□ 0.12
GINS3-203ENST00000426538 SULT1E1P49888 294 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 COPS2P61201 443 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 RPL10AP62906 217 aaKnown RBP15.79■□□□□ 0.12
GINS3-203ENST00000426538 SMTNL2Q2TAL5 461 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 TXNRD3NBQ6F5E7 133 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 HFE2Q6ZVN8 426 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 STRADAQ7RTN6 431 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 ADAT2Q7Z6V5 191 aaKnown RBP15.79■□□□□ 0.12
GINS3-203ENST00000426538 MMGT1Q8N4V1 131 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 KCTD6Q8NC69 237 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 CENPIQ92674 756 aaPredicted RBP15.79■□□□□ 0.12
GINS3-203ENST00000426538 ABHD8Q96I13 439 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 SLC2A13Q96QE2 648 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 CLSTN3Q9BQT9 956 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 RRN3Q9NYV6 651 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 NAALADL1Q9UQQ1 740 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 SSX2IPQ9Y2D8 614 aa15.79■□□□□ 0.12
GINS3-203ENST00000426538 LRRD1A4D1F6 860 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 HAPLN1P10915 354 aaPredicted RBP15.78■□□□□ 0.12
GINS3-203ENST00000426538 DNAJB2P25686 324 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 LLGL1Q15334 1064 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 BSPRYQ5W0U4 402 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 DENND5BQ6ZUT9 1274 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 GPR161Q8N6U8 529 aaKnown RBP15.78■□□□□ 0.12
GINS3-203ENST00000426538 ZNF461Q8TAF7 563 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 HSPH1Q92598 858 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 TBCBQ99426 244 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 C11orf84Q9BUA3 381 aaPredicted RBP15.78■□□□□ 0.12
GINS3-203ENST00000426538 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.78■□□□□ 0.12
GINS3-203ENST00000426538 KLHL11Q9NVR0 708 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 AFF4Q9UHB7 1163 aaKnown RBP15.78■□□□□ 0.12
GINS3-203ENST00000426538 NR2E3Q9Y5X4 410 aa15.78■□□□□ 0.12
GINS3-203ENST00000426538 PI4K2BG5E9Z4 385 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 M0QYT0 321 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 DYNC1I1O14576 645 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 ADAM12O43184 909 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 RTN3O95197 1032 aaPredicted RBP15.77■□□□□ 0.12
GINS3-203ENST00000426538 RHOXF2BP0C7M4 288 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 RARAP10276 462 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 CA8P35219 290 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 GPR15P49685 360 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 HDAC4P56524 1084 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 CREMQ03060 361 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 ELF2Q15723 593 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 PPP2R5EQ16537 467 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 SDHAF4Q5VUM1 108 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 SYPL2Q5VXT5 272 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 BTBD8Q5XKL5 378 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 TPGS2Q68CL5 300 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 GPR65Q8IYL9 337 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 TTC9BQ8N6N2 239 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 KLHL23Q8NBE8 558 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
GINS3-203ENST00000426538 NT5C3BQ969T7 300 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 SPATA17Q96L03 361 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 SLITRK1Q96PX8 696 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 NPY6RQ99463 290 aa15.77■□□□□ 0.12
GINS3-203ENST00000426538 RHOXF2Q9BQY4 288 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms