RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 PDE6CP51160 858 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 MIIPQ5JXC2 388 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 Q6ZS52 159 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 SCD5Q86SK9 330 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 MAML2Q8IZL2 1156 aaPredicted RBP14.36□□□□□ -0.11
SNX3-204ENST00000426155 ANKRD52Q8NB46 1076 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 NDRG1Q92597 394 aaKnown RBP14.36□□□□□ -0.11
SNX3-204ENST00000426155 ATOH1Q92858 354 aaPredicted RBP14.36□□□□□ -0.11
SNX3-204ENST00000426155 CLDN23Q96B33 292 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 ACP6Q9NPH0 428 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 TLR8Q9NR97 1041 aaKnown RBP14.36□□□□□ -0.11
SNX3-204ENST00000426155 SPATA6Q9NWH7 488 aaPredicted RBP14.36□□□□□ -0.11
SNX3-204ENST00000426155 TMEM63CQ9P1W3 806 aa14.36□□□□□ -0.11
SNX3-204ENST00000426155 MRPS17Q9Y2R5 130 aaKnown RBP14.36□□□□□ -0.11
SNX3-204ENST00000426155 KCNJ18B7U540 433 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 MBD3O95983 291 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 CHRNB1P11230 501 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 PRKCSHP14314 528 aaPredicted RBP14.35□□□□□ -0.11
SNX3-204ENST00000426155 PFKLP17858 780 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 TUBP50607 506 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 ZNF132P52740 706 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 BCAT1P54687 386 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 GAS6Q14393 721 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 KCNJ12Q14500 433 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 PDGFRLQ15198 375 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 MAN2A1Q16706 1144 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 RALGPS2Q86X27 583 aaPredicted RBP14.35□□□□□ -0.11
SNX3-204ENST00000426155 NACA2Q9H009 215 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 C8orf33Q9H7E9 229 aaPredicted RBP14.35□□□□□ -0.11
SNX3-204ENST00000426155 ECT2Q9H8V3 914 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 LMAN1LQ9HAT1 526 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 UBE2TQ9NPD8 197 aaPredicted RBP14.35□□□□□ -0.11
SNX3-204ENST00000426155 NAGPAQ9UK23 515 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.35□□□□□ -0.11
SNX3-204ENST00000426155 NFE2L3Q9Y4A8 694 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 USP3Q9Y6I4 520 aa14.35□□□□□ -0.11
SNX3-204ENST00000426155 M0QYV0 167 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 PIK3R2O00459 728 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 PAEPP09466 180 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 PNMA6AP0CW24 399 aaPredicted RBP14.34□□□□□ -0.11
SNX3-204ENST00000426155 RARGP13631 454 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 KRT5P13647 590 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 PON1P27169 355 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 GJA4P35212 333 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 RGS7P49802 495 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 TKTL1P51854 596 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 MLLT6P55198 1093 aaPredicted RBP14.34□□□□□ -0.11
SNX3-204ENST00000426155 ADIGQ0VDE8 80 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 BST2Q10589 180 aaKnown RBP14.34□□□□□ -0.11
SNX3-204ENST00000426155 MTAPQ13126 283 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 ARHGAP44Q17R89 818 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 RAB41Q5JT25 222 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 CCDC183Q5T5S1 534 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 TSSK4Q6SA08 328 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 GBP6Q6ZN66 633 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 BHLHA9Q7RTU4 235 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 CCDC186Q7Z3E2 898 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 C1orf210Q8IVY1 113 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 CPA6Q8N4T0 437 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 ATP2A3Q93084 1043 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 MSANTD3Q96H12 275 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 NELL2Q99435 816 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 TUBGCP2Q9BSJ2 902 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 ULBP1Q9BZM6 244 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 NDST4Q9H3R1 872 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 FBRSL1Q9HCM7 1045 aaKnown RBP14.34□□□□□ -0.11
SNX3-204ENST00000426155 SIX2Q9NPC8 291 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 CYLDQ9NQC7 956 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
SNX3-204ENST00000426155 TAB2Q9NYJ8 693 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 HESX1Q9UBX0 185 aa14.34□□□□□ -0.11
SNX3-204ENST00000426155 BECN2A8MW95 431 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 XPO1O14980 1071 aaKnown RBP14.33□□□□□ -0.12
SNX3-204ENST00000426155 NCAM2O15394 837 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 CYP17A1P05093 508 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 HOXC13P31276 330 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 RPS9P46781 194 aaKnown RBP14.33□□□□□ -0.12
SNX3-204ENST00000426155 EXOC3L4Q17RC7 722 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 GAB4Q2WGN9 574 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 VWA3BQ502W6 1294 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 PKDCCQ504Y2 493 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 FSTL4Q6MZW2 842 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 PKN3Q6P5Z2 889 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 SASS6Q6UVJ0 657 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 LCLAT1Q6UWP7 414 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 FAM114A1Q8IWE2 563 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 SECISBP2LQ93073 1101 aaKnown RBP14.33□□□□□ -0.12
SNX3-204ENST00000426155 KLF16Q9BXK1 252 aaPredicted RBP14.33□□□□□ -0.12
SNX3-204ENST00000426155 CHRDQ9H2X0 955 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 C2orf42Q9NWW7 574 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 APEX2Q9UBZ4 518 aa14.33□□□□□ -0.12
SNX3-204ENST00000426155 ANTXRLA6NF34 631 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 PES1O00541 588 aaKnown RBP14.32□□□□□ -0.12
SNX3-204ENST00000426155 NFATC1O95644 943 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 EGFP01133 1207 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 SETSIPP0DME0 302 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 LCP1P13796 627 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 PLA2G4AP47712 749 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 SLC8A3P57103 927 aa14.32□□□□□ -0.12
SNX3-204ENST00000426155 CCINQ13939 588 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms