RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PRKCIP41743 596 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 TUBP50607 506 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 DAOAP59103 153 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 NOMO3P69849 1222 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 PTPN20Q4JDL3 420 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 MTSS1LQ765P7 747 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 SCUBE3Q8IX30 993 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 CLEC4CQ8WTT0 213 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 RPP25Q9BUL9 199 aaKnown RBP25.72■■□□□ 1.71
VEGFA-209ENST00000425836 RNF38Q9H0F5 515 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 SMG9Q9H0W8 520 aaKnown RBP25.72■■□□□ 1.71
VEGFA-209ENST00000425836 CCSER2Q9H7U1 834 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 NAGPAQ9UK23 515 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 NUMBLQ9Y6R0 609 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 PATJQ8NI35 1801 aa25.72■■□□□ 1.71
VEGFA-209ENST00000425836 TRAV19A0A0A6YYK7 116 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 PRAMEF12O95522 483 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 ASGR2P07307 311 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 SKILP12757 684 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 AVPR1AP37288 418 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 VIPR2P41587 438 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 PSEN1P49768 467 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 YWHAGP61981 247 aaKnown RBP eCLIP25.71■■□□□ 1.71
VEGFA-209ENST00000425836 NAA35Q5VZE5 725 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 TRIM72Q6ZMU5 477 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 TMC6Q7Z403 805 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 RNF135Q8IUD6 432 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 ARHGAP18Q8N392 663 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 CPA5Q8WXQ8 436 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 HAUS4Q9H6D7 363 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 ZFP14Q9HCL3 533 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 IGSF9Q9P2J2 1179 aa25.71■■□□□ 1.71
VEGFA-209ENST00000425836 YJEFN3A6XGL0 299 aa25.7■■□□□ 1.71
VEGFA-209ENST00000425836 E7ENQ6 273 aa25.7■■□□□ 1.71
VEGFA-209ENST00000425836 PAPSS1O43252 624 aaPredicted RBP25.7■■□□□ 1.71
VEGFA-209ENST00000425836 COCHO43405 550 aa25.7■■□□□ 1.71
VEGFA-209ENST00000425836 OLFM2O95897 454 aa25.7■■□□□ 1.71
VEGFA-209ENST00000425836 KLHL30Q0D2K2 578 aa25.7■■□□□ 1.71
VEGFA-209ENST00000425836 TBX2Q13207 712 aaPredicted RBP25.7■■□□□ 1.71
VEGFA-209ENST00000425836 OLIG1Q8TAK6 271 aa25.7■■□□□ 1.71
VEGFA-209ENST00000425836 IRGQQ8WZA9 623 aa25.7■■□□□ 1.71
VEGFA-209ENST00000425836 NXPE3Q969Y0 559 aa25.7■■□□□ 1.71
VEGFA-209ENST00000425836 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.7■■□□□ 1.71
VEGFA-209ENST00000425836 CLIC5Q9NZA1 410 aa25.7■■□□□ 1.71
VEGFA-209ENST00000425836 VCANP13611 3396 aa25.7■■□□□ 1.7
VEGFA-209ENST00000425836 FAM170AA1A519 330 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 TLR5O60602 858 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 ECI2O75521 394 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 ERBB2P04626 1255 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 CKMP06732 381 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 RARGP13631 454 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 HGSNATQ68CP4 663 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 ZNF571Q7Z3V5 609 aaPredicted RBP25.69■■□□□ 1.7
VEGFA-209ENST00000425836 USP13Q92995 863 aaPredicted RBP25.69■■□□□ 1.7
VEGFA-209ENST00000425836 ELSPBP1Q96BH3 223 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 RSPRY1Q96DX4 576 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 KXD1Q9BQD3 176 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 CCL26Q9Y258 94 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 TBX18O95935 607 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 UNGP13051 313 aaPredicted RBP25.69■■□□□ 1.7
VEGFA-209ENST00000425836 BSPRYQ5W0U4 402 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 HFE2Q6ZVN8 426 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 ERICH1Q86X53 443 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 PLA2G2FQ9BZM2 168 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 TDP1Q9NUW8 608 aa25.69■■□□□ 1.7
VEGFA-209ENST00000425836 SEPT11Q9NVA2 429 aaKnown RBP25.69■■□□□ 1.7
VEGFA-209ENST00000425836 DOCK8Q8NF50 2099 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 MYH10P35580 1976 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 TPM1P09493 284 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 RALAP11233 206 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 TNFAIP3P21580 790 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 HNRNPH3P31942 346 aaKnown RBP25.68■■□□□ 1.7
VEGFA-209ENST00000425836 SNX16P57768 344 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 SLC7A9P82251 487 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 GOLGA8FQ08AF8 430 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 GOLGA8DPQ0D2H9 430 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 CLEC16AQ2KHT3 1053 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 ZNF276Q8N554 614 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 OR8K1Q8NGG5 319 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 LRRC3BQ96PB8 259 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 NUDT5Q9UKK9 219 aa25.68■■□□□ 1.7
VEGFA-209ENST00000425836 HEPACAM2A8MVW5 462 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 SART1O43290 800 aaKnown RBP25.67■■□□□ 1.7
VEGFA-209ENST00000425836 GABRB2P47870 512 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 ZXDBP98169 803 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 ZNF268Q14587 947 aaPredicted RBP25.67■■□□□ 1.7
VEGFA-209ENST00000425836 ARID5BQ14865 1188 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 BTBD8Q5XKL5 378 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 SLC44A3Q8N4M1 653 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 CELF5Q8N6W0 485 aaKnown RBP25.67■■□□□ 1.7
VEGFA-209ENST00000425836 SLC30A5Q8TAD4 765 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 IPO4Q8TEX9 1081 aaKnown RBP25.67■■□□□ 1.7
VEGFA-209ENST00000425836 E2F7Q96AV8 911 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 DNAJC7Q99615 494 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 SYNCQ9H7C4 482 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 ARHGAP26Q9UNA1 814 aa25.67■■□□□ 1.7
VEGFA-209ENST00000425836 BZW2Q9Y6E2 419 aaKnown RBP25.67■■□□□ 1.7
VEGFA-209ENST00000425836 DPYSL4O14531 572 aa25.66■■□□□ 1.7
VEGFA-209ENST00000425836 SERPING1P05155 500 aa25.66■■□□□ 1.7
VEGFA-209ENST00000425836 ATP5C1P36542 298 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms