RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 MLH1P40692 756 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 SCTRP47872 440 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 KBTBD12Q3ZCT8 623 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 GNASQ5JWF2 1037 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 CST9Q5W186 159 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 CYP4V2Q6ZWL3 525 aaPredicted RBP12.44□□□□□ -0.42
PTPRN-204ENST00000423636 NME8Q8N427 588 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 SLC35B2Q8TB61 432 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 GCOM2Q9BZD3 368 aaPredicted RBP12.44□□□□□ -0.42
PTPRN-204ENST00000423636 HOMER3Q9NSC5 361 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 KCNK1O00180 336 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 GPR32O75388 356 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 KITP10721 976 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 VDRP11473 427 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 AP3M2P53677 418 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 HDAC4P56524 1084 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 KCNJ2P63252 427 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 ROR1Q01973 937 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 SURF1Q15526 300 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 CLUL1Q15846 466 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 SYPL2Q5VXT5 272 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 DENND5BQ6ZUT9 1274 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 CENPUQ71F23 418 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 TTC17Q96AE7 1141 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 MARCOQ9UEW3 520 aaPredicted RBP12.44□□□□□ -0.42
PTPRN-204ENST00000423636 STRIP2Q9ULQ0 834 aa12.44□□□□□ -0.42
PTPRN-204ENST00000423636 MAGEB2O15479 319 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 KRT7P08729 469 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 IL4RP24394 825 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 CACNA2D1P54289 1103 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 SESN2P58004 480 aaPredicted RBP12.43□□□□□ -0.42
PTPRN-204ENST00000423636 CACNB2Q08289 660 aaPredicted RBP12.43□□□□□ -0.42
PTPRN-204ENST00000423636 MFSD10Q14728 455 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 ANKRD20A8PQ5CZ79 823 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 CGB2Q6NT52 195 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 OSTM1Q86WC4 334 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 USP6NLQ92738 828 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 MOCOSQ96EN8 888 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 TBCBQ99426 244 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 ADAMTS10Q9H324 1103 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 ASNSD1Q9NWL6 643 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 BAIAP2L1Q9UHR4 511 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 GOLGA8TH3BQL2 631 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 CDH16O75309 829 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 METTL18O95568 372 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 MDH1BQ5I0G3 518 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 C9orf57Q5W0N0 161 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 TRMT10BQ6PF06 316 aaKnown RBP12.43□□□□□ -0.42
PTPRN-204ENST00000423636 LVRNQ6Q4G3 990 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 PLD5Q8N7P1 536 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 C2orf69Q8N8R5 385 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 PAFAH2Q99487 392 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 CCDC77Q9BR77 488 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 PITPNM3Q9BZ71 974 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 SNX25Q9H3E2 840 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 ABHD16BQ9H3Z7 469 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 ANK1P16157 1881 aa12.43□□□□□ -0.42
PTPRN-204ENST00000423636 KPNA7A9QM74 516 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 ZBED1O96006 694 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 P4HA1P13674 534 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 ZNF143P52747 638 aaPredicted RBP12.42□□□□□ -0.42
PTPRN-204ENST00000423636 MGAT5Q09328 741 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 SNX17Q15036 470 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 SEPT7Q16181 437 aaKnown RBP12.42□□□□□ -0.42
PTPRN-204ENST00000423636 SPRYD7Q5W111 196 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 SLC27A1Q6PCB7 646 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 C6orf89Q6UWU4 347 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 DEFB106AQ8N104 65 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 TTC16Q8NEE8 873 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 CNOT10Q9H9A5 744 aaKnown RBP12.42□□□□□ -0.42
PTPRN-204ENST00000423636 SLC40A1Q9NP59 571 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 VTA1Q9NP79 307 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 TMEM30AQ9NV96 361 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 MIOSQ9NXC5 875 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 CYB561D2O14569 222 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 SLC26A2P50443 739 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 FAAP100Q0VG06 881 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 AP1B1Q10567 949 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 FBXO47Q5MNV8 452 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 RFX8Q6ZV50 586 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 PQLC3Q8N755 202 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 MCRS1Q96EZ8 462 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 SERPINB12Q96P63 405 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 UNKQ9C0B0 810 aaKnown RBP12.42□□□□□ -0.42
PTPRN-204ENST00000423636 ETNK1Q9HBU6 452 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 NPHS2Q9NP85 383 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 UBN1Q9NPG3 1134 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 VCANP13611 3396 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 GAS2O43903 313 aaKnown RBP12.42□□□□□ -0.42
PTPRN-204ENST00000423636 CYP2F1P24903 491 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 CTGFP29279 349 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 MROH9Q5TGP6 573 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 KIAA0319Q5VV43 1072 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 OLFML1Q6UWY5 402 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 PIGZQ86VD9 579 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 KBTBD7Q8WVZ9 684 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 ASB7Q9H672 318 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 PCDH18Q9HCL0 1135 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 IPPQ9Y573 584 aa12.42□□□□□ -0.42
PTPRN-204ENST00000423636 CCT8L1PA6NM43 557 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms