RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 KIF11P52732 1056 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 TNK2Q07912 1038 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 BST2Q10589 180 aaKnown RBP11.53□□□□□ -0.56
USP49-204ENST00000423567 LRRC32Q14392 662 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 KCNJ12Q14500 433 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 VWA3BQ502W6 1294 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 HSP90AA4PQ58FG1 418 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 TRIM68Q6AZZ1 485 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 TRIM65Q6PJ69 517 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 GPRIN1Q7Z2K8 1008 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 PIGZQ86VD9 579 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 IRF2BP1Q8IU81 584 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 SPNS2Q8IVW8 549 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 ARHGEF19Q8IW93 802 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 ARHGAP18Q8N392 663 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 KIAA1958Q8N8K9 716 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 RBBP8NLQ8NC74 664 aaPredicted RBP11.53□□□□□ -0.56
USP49-204ENST00000423567 ANKRD20A12PQ8NF67 263 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 ENOX1Q8TC92 643 aaKnown RBP11.53□□□□□ -0.56
USP49-204ENST00000423567 ATOH1Q92858 354 aaPredicted RBP11.53□□□□□ -0.56
USP49-204ENST00000423567 KAT5Q92993 513 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 CDK5RAP1Q96SZ6 601 aaKnown RBP11.53□□□□□ -0.56
USP49-204ENST00000423567 TUBGCP2Q9BSJ2 902 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 CRACR2AQ9BSW2 395 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 RNF38Q9H0F5 515 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 CCSER2Q9H7U1 834 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 LRRC4Q9HBW1 653 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 SPATA6Q9NWH7 488 aaPredicted RBP11.53□□□□□ -0.56
USP49-204ENST00000423567 CFAP97Q9P2B7 532 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 NAGPAQ9UK23 515 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 LHX6Q9UPM6 363 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 SH3BP1Q9Y3L3 701 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 NFE2L3Q9Y4A8 694 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 TRIOO75962 3097 aa11.53□□□□□ -0.56
USP49-204ENST00000423567 A0A1W2PQH9 124 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 HHLA1C9JL84 531 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 O00370 1275 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.57
USP49-204ENST00000423567 COCHO43405 550 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 TLR5O60602 858 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 ATP5C1P36542 298 aaKnown RBP11.52□□□□□ -0.57
USP49-204ENST00000423567 PLA2G5P39877 138 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 RPS9P46781 194 aaKnown RBP11.52□□□□□ -0.57
USP49-204ENST00000423567 SOX9P48436 509 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 ANGPT1Q15389 498 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 LCLAT1Q6UWP7 414 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 CCDC186Q7Z3E2 898 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 TTC30AQ86WT1 665 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 SIX6OS1Q8N1H7 587 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 NAT10Q9H0A0 1025 aaKnown RBP11.52□□□□□ -0.57
USP49-204ENST00000423567 NDST4Q9H3R1 872 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 HPS4Q9NQG7 708 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 TBC1D14Q9P2M4 693 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 APEX2Q9UBZ4 518 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 MTF2Q9Y483 593 aaPredicted RBP11.52□□□□□ -0.57
USP49-204ENST00000423567 WNT6Q9Y6F9 365 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 NUP210Q8TEM1 1887 aaPredicted RBP11.52□□□□□ -0.57
USP49-204ENST00000423567 PTPRDP23468 1912 aa11.52□□□□□ -0.57
USP49-204ENST00000423567 H0Y858 1186 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 M0QYV0 167 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 LAMTOR5O43504 91 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 MED7O43513 233 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 RARGP13631 454 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 ARSAP15289 507 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 SLC9A1P19634 815 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 PTMSP20962 102 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 BRD2P25440 801 aaKnown RBP11.51□□□□□ -0.57
USP49-204ENST00000423567 USP8P40818 1118 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 PLA2G4AP47712 749 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 TKTL1P51854 596 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 PDE4CQ08493 712 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 GRSF1Q12849 480 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP49-204ENST00000423567 TCF15Q12870 199 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 PON2Q15165 354 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 CNGA2Q16280 664 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 EML3Q32P44 896 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 TCP11X2Q5H9J9 407 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 DGKKQ5KSL6 1271 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 C10orf120Q5SQS8 335 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 C1orf210Q8IVY1 113 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 RIN3Q8TB24 985 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 UBA3Q8TBC4 463 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 CLDN23Q96B33 292 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 KREMEN1Q96MU8 473 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 IER2Q9BTL4 223 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 ECT2Q9H8V3 914 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 LMAN1LQ9HAT1 526 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 CYLDQ9NQC7 956 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 SAMSN1Q9NSI8 373 aaKnown RBP11.51□□□□□ -0.57
USP49-204ENST00000423567 CLIC5Q9NZA1 410 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 DLGAP2Q9P1A6 1054 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 DNMT3LQ9UJW3 386 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 LSM7Q9UK45 103 aaKnown RBP11.51□□□□□ -0.57
USP49-204ENST00000423567 USP3Q9Y6I4 520 aa11.51□□□□□ -0.57
USP49-204ENST00000423567 ZNF318Q5VUA4 2279 aa11.5□□□□□ -0.57
USP49-204ENST00000423567 E2F8A0AVK6 867 aa11.5□□□□□ -0.57
USP49-204ENST00000423567 ZBED1O96006 694 aa11.5□□□□□ -0.57
USP49-204ENST00000423567 PON1P27169 355 aa11.5□□□□□ -0.57
USP49-204ENST00000423567 ZNF132P52740 706 aa11.5□□□□□ -0.57
USP49-204ENST00000423567 MYL5Q02045 173 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms