RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 SWT1Q5T5J6 900 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SPATA31D4Q6ZUB0 917 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CHSY1Q86X52 802 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TTLL11Q8NHH1 800 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SNX29Q8TEQ0 813 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SPAG5Q96R06 1193 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ZSCAN10Q96SZ4 725 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 COPS7BQ9H9Q2 264 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ANLNQ9NQW6 1124 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 EMILIN3Q9NT22 766 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 MBD1Q9UIS9 605 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 OGDHLQ9ULD0 1010 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ARIH1Q9Y4X5 557 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SNED1Q8TER0 1413 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 GSTTP1A0A1W2PQM5 241 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ZNF891A8MT65 544 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 IGF2BP3O00425 579 aaKnown RBP eCLIP3.7□□□□□ -1.826e-7■■□□□ 11.9
TOP2A-201ENST00000423485 FFAR2O15552 330 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 KLF8O95600 359 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 MX1P20591 662 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TARSP26639 723 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ERCC5P28715 1186 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CDC25AP30304 524 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GJC1P36383 396 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 MPLP40238 635 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CRYBB1P53674 252 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RBP5P82980 135 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 FAM160A1Q05DH4 1040 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RALGDSQ12967 914 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GRIK3Q13003 919 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 FNBP1LQ5T0N5 605 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 OVOS1Q6IE37 1185 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 PPP1R2P3Q6NXS1 205 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RRAGAQ7L523 313 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 FAM178BQ8IXR5 827 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 VMP1Q96GC9 406 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 PBX4Q9BYU1 374 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 KCNF1Q9H3M0 494 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 PDLIM7Q9NR12 457 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TRMT13Q9NUP7 481 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TMEM161AQ9NX61 479 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 BTBD7Q9P203 1132 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 LRWD1Q9UFC0 647 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 NAGPAQ9UK23 515 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 LCHNA4D1U4 455 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CDC14CA4D256 554 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DRGXA6NNA5 263 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 FOXO6A8MYZ6 492 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DNAJC6O75061 913 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 H2AFYO75367 372 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RFPL3O75679 317 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SERPIND1P05546 499 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DCNP07585 359 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 AKAP5P24588 427 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TNFRSF8P28908 595 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SOX5P35711 763 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 LONP1P36776 959 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 PTPN9P43378 593 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SH3BGRP55822 239 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 POLR2LP62875 67 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ARG2P78540 354 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SPIRE1Q08AE8 756 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DNTTIP2Q5QJE6 756 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 PDSS1Q5T2R2 415 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 STPG1Q5TH74 334 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SNX30Q5VWJ9 437 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 BRAPQ7Z569 592 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 METTL3Q86U44 580 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RALGPS2Q86X27 583 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DSELQ8IZU8 1212 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GUF1Q8N442 669 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 L3MBTL4Q8NA19 623 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DIS3LQ8TF46 1054 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 UBLCP1Q8WVY7 318 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RIT1Q92963 219 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 ALKBH8Q96BT7 664 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SCYL1Q96KG9 808 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 GMLQ99445 158 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DNPEPQ9ULA0 475 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 BARX2Q9UMQ3 279 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SLC27A6Q9Y2P4 619 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TDRKHQ9Y2W6 561 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SNX9Q9Y5X1 595 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 SNX8Q9Y5X2 465 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 RAD54BQ9Y620 910 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 STK36Q9NRP7 1315 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 F8VZ95 297 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TEX33O43247 280 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 BMP10O95393 424 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 TDP2O95551 362 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 HBQ1P09105 142 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 OR12D1P0DN82 309 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 MYF5P13349 255 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 DARSP14868 501 aaKnown RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 CYP2A7P20853 494 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 HOXA13P31271 388 aaPredicted RBP3.7□□□□□ -1.82
TOP2A-201ENST00000423485 MASP1P48740 699 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 USP11P51784 963 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 AP3M2P53677 418 aa3.7□□□□□ -1.82
TOP2A-201ENST00000423485 HNRNPKP61978 463 aaKnown RBP eCLIP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms