RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 CYP3A43Q9HB55 503 aa11.46□□□□□ -0.57
LIMS1-207ENST00000422797 IFT122Q9HBG6 1241 aa11.46□□□□□ -0.57
LIMS1-207ENST00000422797 AS3MTQ9HBK9 375 aa11.46□□□□□ -0.57
LIMS1-207ENST00000422797 VCX3AQ9NNX9 186 aa11.46□□□□□ -0.57
LIMS1-207ENST00000422797 ZDHHC7Q9NXF8 308 aa11.46□□□□□ -0.57
LIMS1-207ENST00000422797 NDUFA13Q9P0J0 144 aa11.46□□□□□ -0.57
LIMS1-207ENST00000422797 PPP1R1BQ9UD71 204 aaPredicted RBP11.46□□□□□ -0.57
LIMS1-207ENST00000422797 C2CD2Q9Y426 696 aa11.46□□□□□ -0.57
LIMS1-207ENST00000422797 BCLAF3A2AJT9 711 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 KLHL33A6NCF5 533 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 GOLGA8RI6L899 631 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 PLSCR1O15162 318 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 B4GALT4O60513 344 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 SNNO75324 88 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 BANF1O75531 89 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 P4HA1P13674 534 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ANPEPP15144 967 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 DYNLT1P63172 113 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 HNRNPDQ14103 355 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 PTPN20Q4JDL3 420 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 MAP3K21Q5TCX8 1036 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 TXNRD3NBQ6F5E7 133 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 NUDCD3Q8IVD9 361 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 CDKL3Q8IVW4 592 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 WDR75Q8IWA0 830 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 WDTC1Q8N5D0 677 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ELMO3Q96BJ8 720 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 CNPY3Q9BT09 278 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 HAPLN2Q9GZV7 340 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ASCC2Q9H1I8 757 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 RPAP3Q9H6T3 665 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 PRDM16Q9HAZ2 1276 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 XAB2Q9HCS7 855 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 FBXO6Q9NRD1 293 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 THAP1Q9NVV9 213 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ETAA1Q9NY74 926 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 PPARGC1AQ9UBK2 798 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ZC3H7BQ9UGR2 993 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 USP18Q9UMW8 372 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 SOX13Q9UN79 622 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 PLA2G4CQ9UP65 541 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 HBS1LQ9Y450 684 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 TTLL3Q9Y4R7 772 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 IGKV6D-21A0A0A0MT36 114 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 SPDYE5A6NIY4 337 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 H3BRJ5 948 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 APOEP02649 317 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 HMGCRP04035 888 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 PIM1P11309 404 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ZFXP17010 805 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 TPSB2P20231 275 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ATICP31939 592 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ASPAP45381 313 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ZNF143P52747 638 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 SNX16P57768 344 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 MYL6P60660 151 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 YWHAZP63104 245 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 BST1Q10588 318 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 MXD4Q14582 209 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 STILQ15468 1287 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 TPSAB1Q15661 275 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 TEX44Q53QW1 395 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 CYP4A22Q5TCH4 519 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 IER5Q5VY09 327 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 DENND1BQ6P3S1 775 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ACAD11Q709F0 780 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 TRMT1LQ7Z2T5 733 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 KRT27Q7Z3Y8 459 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 SDCCAG8Q86SQ7 713 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 XYLT1Q86Y38 959 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 CCNJLQ8IV13 435 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ULK2Q8IYT8 1036 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ST13P4Q8IZP2 240 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 DNERQ8NFT8 737 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 AFG1LQ8WV93 481 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 NRG4Q8WWG1 115 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 TMEM143Q96AN5 459 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 KLF6Q99612 283 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ECSITQ9BQ95 431 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 BCO2Q9BYV7 579 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 SDCBP2Q9H190 292 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ACAD9Q9H845 621 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 POPDC2Q9HBU9 364 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 DMAP1Q9NPF5 467 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 ARHGEF4Q9NR80 690 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 CPSF3Q9UKF6 684 aaKnown RBP11.45□□□□□ -0.58
LIMS1-207ENST00000422797 KIAA1257Q9ULG3 409 aa11.45□□□□□ -0.58
LIMS1-207ENST00000422797 TCRBV7S3A2A0A539 114 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 H7C0C1 242 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 PDLIM1O00151 329 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 DPYSL4O14531 572 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 FAM189A1O60320 539 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 BPGMP07738 259 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 GPD1P21695 349 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 GRK2P25098 689 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 IL1R2P27930 398 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 PRDX6P30041 224 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 MIPP30301 263 aa11.44□□□□□ -0.58
LIMS1-207ENST00000422797 ATP5OP48047 213 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms