RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 EXD1Q8NHP7 514 aa13.71□□□□□ -0.22
CALD1-205ENST00000422748 CPA5Q8WXQ8 436 aa13.71□□□□□ -0.22
CALD1-205ENST00000422748 DHX38Q92620 1227 aaKnown RBP13.71□□□□□ -0.22
CALD1-205ENST00000422748 HEPHQ9BQS7 1158 aa13.71□□□□□ -0.22
CALD1-205ENST00000422748 NEURL2Q9BR09 285 aa13.71□□□□□ -0.22
CALD1-205ENST00000422748 TMEM121Q9BTD3 319 aa13.71□□□□□ -0.22
CALD1-205ENST00000422748 FBXO9Q9UK97 447 aaPredicted RBP13.71□□□□□ -0.22
CALD1-205ENST00000422748 PADI4Q9UM07 663 aa13.71□□□□□ -0.22
CALD1-205ENST00000422748 SGK1O00141 431 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 OCM2P0CE71 109 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 OCMP0CE72 109 aaPredicted RBP13.7□□□□□ -0.22
CALD1-205ENST00000422748 ZNF23P17027 643 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 ITGAXP20702 1163 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 PPP4CP60510 307 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 FBXW8Q8N3Y1 598 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 CCDC33Q8N5R6 958 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 ZSWIM2Q8NEG5 633 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 TSPAN14Q8NG11 270 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 ZNF512Q96ME7 567 aaPredicted RBP13.7□□□□□ -0.22
CALD1-205ENST00000422748 NLRP4Q96MN2 994 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 EIF2AK1Q9BQI3 630 aaKnown RBP13.7□□□□□ -0.22
CALD1-205ENST00000422748 TBC1D23Q9NUY8 699 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 HERC5Q9UII4 1024 aaKnown RBP13.7□□□□□ -0.22
CALD1-205ENST00000422748 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
CALD1-205ENST00000422748 A0A0B4J269 797 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 USP17L10C9JJH3 530 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 XPO1O14980 1071 aaKnown RBP13.7□□□□□ -0.22
CALD1-205ENST00000422748 STAMBPO95630 424 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 SLC5A3P53794 718 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 MFAP3P55082 362 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 NUP107P57740 925 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 TUBB3Q13509 450 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 ZNF423Q2M1K9 1284 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 BBS9Q3SYG4 887 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 RARS2Q5T160 578 aaKnown RBP13.7□□□□□ -0.22
CALD1-205ENST00000422748 DCDC5Q6ZRR9 648 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 TCHPQ9BT92 498 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 PACSIN3Q9UKS6 424 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 IKBKGQ9Y6K9 419 aa13.7□□□□□ -0.22
CALD1-205ENST00000422748 ASTN2O75129 1339 aaPredicted RBP13.7□□□□□ -0.22
CALD1-205ENST00000422748 FBXO21O94952 628 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 ATP5BP06576 529 aaKnown RBP13.69□□□□□ -0.22
CALD1-205ENST00000422748 MXI1P50539 228 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 CDK18Q07002 472 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 ODR4Q5SWX8 454 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 THOC7Q6I9Y2 204 aaKnown RBP13.69□□□□□ -0.22
CALD1-205ENST00000422748 ZCCHC23Q6ZST2 131 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 UBR3Q6ZT12 1888 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 FASTKD5Q7L8L6 764 aaKnown RBP13.69□□□□□ -0.22
CALD1-205ENST00000422748 SLC9A9Q8IVB4 645 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 NUDCD3Q8IVD9 361 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 HSPH1Q92598 858 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 CASP10Q92851 521 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 SEMA4DQ92854 862 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 CELF1Q92879 486 aaKnown RBP13.69□□□□□ -0.22
CALD1-205ENST00000422748 LRGUKQ96M69 825 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 RANBP9Q96S59 729 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 APOL6Q9BWW8 343 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 KLC2Q9H0B6 622 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 AVENQ9NQS1 362 aaPredicted RBP13.69□□□□□ -0.22
CALD1-205ENST00000422748 XPNPEP1Q9NQW7 623 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 ITGA11Q9UKX5 1188 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 SORCS3Q9UPU3 1222 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 UBE4BO95155 1302 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 TBC1D12O60347 775 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 ZMPSTE24O75844 475 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 FAM155BO75949 473 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 OXSR1O95747 527 aaPredicted RBP13.69□□□□□ -0.22
CALD1-205ENST00000422748 INHBAP08476 426 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 ALDH3B2P48448 385 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 NOVP48745 357 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 WASHC5Q12768 1159 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 GRIK5Q16478 980 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 DRICH1Q6PGQ1 229 aaPredicted RBP13.69□□□□□ -0.22
CALD1-205ENST00000422748 SLC30A10Q6XR72 485 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 CPT1BQ92523 772 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 LENG9Q96B70 501 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 HAUS8Q9BT25 410 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 PAIP1Q9H074 479 aaKnown RBP13.69□□□□□ -0.22
CALD1-205ENST00000422748 PCDH9Q9HC56 1237 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 SIRPGQ9P1W8 387 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.69□□□□□ -0.22
CALD1-205ENST00000422748 PLLPQ9Y342 182 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 SNCAIPQ9Y6H5 919 aa13.69□□□□□ -0.22
CALD1-205ENST00000422748 TCRBV7S3A2A0A539 114 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 SNHG28P0DPA3 235 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 UNGP13051 313 aaPredicted RBP13.68□□□□□ -0.22
CALD1-205ENST00000422748 ADGRE1Q14246 886 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 MFSD7Q6UXD7 560 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 STXBP4Q6ZWJ1 553 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 KRT27Q7Z3Y8 459 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 TXNRD3Q86VQ6 643 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 TICAM1Q8IUC6 712 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 RNF169Q8NCN4 708 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 GRIN3AQ8TCU5 1115 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 SLC44A1Q8WWI5 657 aa13.68□□□□□ -0.22
CALD1-205ENST00000422748 DHRS1Q96LJ7 313 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms