RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 B4DLN1 442 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 C5orf67F2Z3F1 127 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 IKBKBO14920 756 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 GRM6O15303 877 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 NDUFA10O95299 355 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 NDUFB10O96000 172 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 TXNP10599 105 aaKnown RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 CYP2D6P10635 497 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 ATF7P17544 494 aaPredicted RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 CASTP20810 708 aaKnown RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 BMPR1AP36894 532 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 KIR2DL3P43628 341 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 CLCN5P51795 746 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 STAT2P52630 851 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 MRPL12P52815 198 aaKnown RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 SEC24CP53992 1094 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 RBL2Q08999 1139 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 DMWDQ09019 674 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 GPNMBQ14956 572 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 TTF1Q15361 905 aaPredicted RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 TMEM63BQ5T3F8 832 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 ZNF618Q5T7W0 954 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 SLC9C2Q5TAH2 1124 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 RTN4RL1Q86UN2 441 aaPredicted RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 MCF2L2Q86YR7 1114 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 ARHGEF19Q8IW93 802 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 DHX37Q8IY37 1157 aaKnown RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 EFHBQ8N7U6 833 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 ST13P5Q8NFI4 369 aaPredicted RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 DBF4BQ8NFT6 615 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 SCFD2Q8WU76 684 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 SEPT8Q92599 483 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 DLG3Q92796 817 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 TOP1MTQ969P6 601 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 FOXRED1Q96CU9 486 aaPredicted RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 MSLNLQ96KJ4 702 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 IPO9Q96P70 1041 aaKnown RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 MEIS3Q99687 375 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 RIOK1Q9BRS2 568 aaKnown RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 KATNAL1Q9BW62 490 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 OSBPL2Q9H1P3 480 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 GPR108Q9NPR9 543 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 DLL3Q9NYJ7 618 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 COQ6Q9Y2Z9 468 aa5.69□□□□□ -1.5
SFXN1-202ENST00000421887 DDX49Q9Y6V7 483 aaKnown RBP5.69□□□□□ -1.5
SFXN1-202ENST00000421887 KMT2BQ9UMN6 2715 aaPredicted RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 LOC102724159A0A0B4J2E5 919 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 SLC12A8A0AV02 714 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 PTPDC1A2A3K4 754 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 TMEM200CA6NKL6 621 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 RSPH10B2B2RC85 870 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 NCR1O76036 304 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 MMP1P03956 469 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 RSPH10BP0C881 870 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 HNRNPLP14866 589 aaKnown RBP eCLIP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 SP100P23497 879 aaPredicted RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 APOBEC3AP31941 199 aaPredicted RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 THPOP40225 353 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 NRIP1P48552 1158 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 ALDH5A1P51649 535 aaPredicted RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 ROM1Q03395 351 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 FOXI1Q12951 378 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 MTX1Q13505 466 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 PWP2Q15269 919 aaKnown RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 ANGPT1Q15389 498 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 C16orf86Q6ZW13 317 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 ANKS3Q6ZW76 656 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 RBM23Q86U06 439 aaKnown RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 SESTD1Q86VW0 696 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 RPAP2Q8IXW5 612 aaPredicted RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 CYP2W1Q8TAV3 490 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 CHURC1Q8WUH1 139 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 SSH1Q8WYL5 1049 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 RUBCNQ92622 972 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 NEK1Q96PY6 1258 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 API5Q9BZZ5 524 aaKnown RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 AKIP1Q9NQ31 210 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 ATP8A2Q9NTI2 1148 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 POLR3BQ9NW08 1133 aaPredicted RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 CYP39A1Q9NYL5 469 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 NYAP2Q9P242 653 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 CLIP2Q9UDT6 1046 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 BARX2Q9UMQ3 279 aaPredicted RBP5.68□□□□□ -1.5
SFXN1-202ENST00000421887 EPG5Q9HCE0 2579 aa5.68□□□□□ -1.5
SFXN1-202ENST00000421887 GVINP1Q7Z2Y8 2422 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 TRBV23-1A0A0A0MS06 115 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 TMEM232C9JQI7 657 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 FGRP09769 529 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 HKR1P10072 659 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 ABCG1P45844 678 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 SUMO1P63165 101 aaKnown RBP5.67□□□□□ -1.5
SFXN1-202ENST00000421887 BTG3Q14201 252 aaPredicted RBP5.67□□□□□ -1.5
SFXN1-202ENST00000421887 TCTN1Q2MV58 587 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 FAM209AQ5JX71 171 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 C12orf60Q5U649 245 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 FAM160B2Q86V87 743 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 CKAP2LQ8IYA6 745 aa5.67□□□□□ -1.5
SFXN1-202ENST00000421887 LILRA3Q8N6C8 439 aaPredicted RBP5.67□□□□□ -1.5
SFXN1-202ENST00000421887 FAM98AQ8NCA5 519 aaKnown RBP5.67□□□□□ -1.5
SFXN1-202ENST00000421887 APBB2Q92870 758 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms