RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 RBBP8NLQ8NC74 664 aaPredicted RBP22.53■■□□□ 1.2
CPNE1-211ENST00000420363 TUBGCP2Q9BSJ2 902 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 NDST4Q9H3R1 872 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 CYLDQ9NQC7 956 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 NFE2L3Q9Y4A8 694 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 KCNJ18B7U540 433 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 CYP26A1O43174 497 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 COCHO43405 550 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 ABL1P00519 1130 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 TARSP26639 723 aaKnown RBP22.52■■□□□ 1.2
CPNE1-211ENST00000420363 CTHP32929 405 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 KPNA1P52294 538 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-211ENST00000420363 KCNJ12Q14500 433 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 VWA3BQ502W6 1294 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 MIIPQ5JXC2 388 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 LCLAT1Q6UWP7 414 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 PIGZQ86VD9 579 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 ZNF687Q8N1G0 1237 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 FAM3CQ92520 227 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 CRACR2AQ9BSW2 395 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 RNF38Q9H0F5 515 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 HPS4Q9NQG7 708 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 GKN1Q9NS71 199 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 GTSE1Q9NYZ3 720 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 TMEM63CQ9P1W3 806 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 CHORDC1Q9UHD1 332 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-211ENST00000420363 CPQQ9Y646 472 aa22.52■■□□□ 1.2
CPNE1-211ENST00000420363 SPECC1L-ADORA2AF8WAN1 911 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 LEFTY2O00292 366 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 PLA2G4AP47712 749 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 ZXDBP98169 803 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 TNK2Q07912 1038 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 RUNX3Q13761 415 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 MEA1Q16626 185 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 PKDCCQ504Y2 493 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 TCP11X2Q5H9J9 407 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 CDKAL1Q5VV42 579 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 KLHDC10Q6PID8 442 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 ZNF276Q8N554 614 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 DCLK2Q8N568 766 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 SUMF1Q8NBK3 374 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 ATP2A3Q93084 1043 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 ZFRQ96KR1 1074 aaKnown RBP22.51■■□□□ 1.19
CPNE1-211ENST00000420363 IER2Q9BTL4 223 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 UBE2TQ9NPD8 197 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-211ENST00000420363 SAMSN1Q9NSI8 373 aaKnown RBP22.51■■□□□ 1.19
CPNE1-211ENST00000420363 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.51■■□□□ 1.192e-6■■■■■ 55.4
CPNE1-211ENST00000420363 PCDHGA2Q9Y5H1 932 aa22.51■■□□□ 1.19
CPNE1-211ENST00000420363 DCHS1Q96JQ0 3298 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 TLR5O60602 858 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 MBL2P11226 248 aaPredicted RBP22.5■■□□□ 1.19
CPNE1-211ENST00000420363 PON1P27169 355 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 IFNAR2P48551 515 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 MFAP3P55082 362 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 CNGA2Q16280 664 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 EML3Q32P44 896 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 CPA6Q8N4T0 437 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 RMDN1Q96DB5 314 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 CDK5RAP1Q96SZ6 601 aaKnown RBP22.5■■□□□ 1.19
CPNE1-211ENST00000420363 CCSER2Q9H7U1 834 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 ZSCAN32Q9NX65 697 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 DUS2Q9NX74 493 aaKnown RBP22.5■■□□□ 1.19
CPNE1-211ENST00000420363 CLIC5Q9NZA1 410 aa22.5■■□□□ 1.19
CPNE1-211ENST00000420363 OTOGLQ3ZCN5 2332 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 FRYLO94915 3013 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 RNF225M0QZC1 329 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-211ENST00000420363 SLC9A1P19634 815 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 AMPD2Q01433 879 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 PDE4CQ08493 712 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 TRIM68Q6AZZ1 485 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 C11orf57Q6ZUT1 292 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-211ENST00000420363 TADA2BQ86TJ2 420 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 ARHGAP18Q8N392 663 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 KCTD13Q8WZ19 329 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 TFAP2BQ92481 460 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 EBF3Q9H4W6 596 aa22.49■■□□□ 1.19
CPNE1-211ENST00000420363 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.49■■□□□ 1.19
CPNE1-211ENST00000420363 NDRG2Q9UN36 371 aaKnown RBP22.49■■□□□ 1.19
CPNE1-211ENST00000420363 SLC9A3R1O14745 358 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-211ENST00000420363 NFATC1O95644 943 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 ARSAP15289 507 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 SOX9P48436 509 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 PGFP49763 221 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 MYL5Q02045 173 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 FZD5Q13467 585 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 HSP90AA4PQ58FG1 418 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 SCML4Q8N228 414 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 SHC3Q92529 594 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 ZSWIM1Q9BR11 485 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 NACA2Q9H009 215 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 SIX2Q9NPC8 291 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 SMPD4Q9NXE4 827 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 NCDNQ9UBB6 729 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 WNT6Q9Y6F9 365 aa22.48■■□□□ 1.19
CPNE1-211ENST00000420363 A0A1W2PQH9 124 aa22.47■■□□□ 1.19
CPNE1-211ENST00000420363 E2F8A0AVK6 867 aa22.47■■□□□ 1.19
CPNE1-211ENST00000420363 KRT5P13647 590 aa22.47■■□□□ 1.19
CPNE1-211ENST00000420363 PTMSP20962 102 aa22.47■■□□□ 1.19
CPNE1-211ENST00000420363 BRD2P25440 801 aaKnown RBP22.47■■□□□ 1.19
CPNE1-211ENST00000420363 MTAPQ13126 283 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms