RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PDZD3Q86UT5 571 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 MIB1Q86YT6 1006 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 DEFB119Q8N690 84 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 ANKRD36BP1Q96IX9 119 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 HSPA12BQ96MM6 686 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 CAMK1GQ96NX5 476 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 SLITRK1Q96PX8 696 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 FGFBP2Q9BYJ0 223 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 ELOVL4Q9GZR5 314 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 TBC1D7Q9P0N9 293 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 STARD13Q9Y3M8 1113 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 ADAMTS9Q9P2N4 1935 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 FRMD3A2A2Y4 597 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 TBC1D3BA6NDS4 549 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 RIOK3O14730 519 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 COCHO43405 550 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 ZNF217O75362 1048 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 ABL1P00519 1130 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 SYPP08247 313 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 FTH1P19P0C7X4 201 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 NDUFV2P19404 249 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 NTSR1P30989 418 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 TRIP6Q15654 476 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 COL28A1Q2UY09 1125 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 PREPLQ4J6C6 727 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 C10orf76Q5T2E6 689 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 TDRD10Q5VZ19 366 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 BTBD8Q5XKL5 378 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 EGFLAMQ63HQ2 1017 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 CCNI2Q6ZMN8 369 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 GLRX5Q86SX6 157 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 NAXDQ8IW45 347 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 BBS7Q8IWZ6 715 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 GPD1LQ8N335 351 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 TRIML1Q8N9V2 468 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 PDZD8Q8NEN9 1154 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 OVCA2Q8WZ82 227 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 EPSTI1Q96J88 318 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 MRPL45Q9BRJ2 306 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 ZNF518BQ9C0D4 1074 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 DEC1Q9P2X7 70 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 IGSF10Q6WRI0 2623 aa10.85□□□□□ -0.67
TNFAIP3-202ENST00000420009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 KIAA0391O15091 583 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 TRIM24O15164 1050 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 CBFA2T3O75081 653 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 TACC1O75410 805 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 TNNC2P02585 160 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 YWHAQP27348 245 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 GJB2P29033 226 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 TUBP50607 506 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 SF3A1Q15459 793 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 DUOXA2Q1HG44 320 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 PLEKHG6Q3KR16 790 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 SNX30Q5VWJ9 437 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 C19orf48Q6RUI8 117 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 TMEM25Q86YD3 366 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 CBWD2Q8IUF1 395 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 WDR49Q8IV35 697 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 SYCP3Q8IZU3 236 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 NAT16Q8N8M0 369 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 IPO4Q8TEX9 1081 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 ZNF419Q96HQ0 510 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 ACOX2Q99424 681 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 GABRG3Q99928 467 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 DPEP3Q9H4B8 488 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 PCIF1Q9H4Z3 704 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 FAM124BQ9H5Z6 455 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 CCDC86Q9H6F5 360 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 CD93Q9NPY3 652 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 SPHK2Q9NRA0 654 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 SUSD2Q9UGT4 822 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 CYP8B1Q9UNU6 501 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 R3HCC1Q9Y3T6 440 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 MYOFQ9NZM1 2061 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 CEP192Q8TEP8 1941 aa10.84□□□□□ -0.67
TNFAIP3-202ENST00000420009 ZNF233A6NK53 670 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 CLDN5O00501 218 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 CACNG3O60359 315 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 RTN3O95197 1032 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 FAM163BP0C2L3 166 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 ZDHHC11BP0C7U3 371 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 PTPN1P18031 435 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 GNL1P36915 607 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 WASP42768 502 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 IFRD2Q12894 506 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 GRIK2Q13002 908 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 SURF1Q15526 300 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 HECTD3Q5T447 861 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 NUDT18Q6ZVK8 323 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 HS2ST1Q7LGA3 356 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 TRAPPC11Q7Z392 1133 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 BRAPQ7Z569 592 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 CHPFQ8IZ52 775 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 NUP93Q8N1F7 819 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 PNPLA1Q8N8W4 532 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 B3GALNT2Q8NCR0 500 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 NOC3LQ8WTT2 800 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 FBXO32Q969P5 355 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms