RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 CREMQ03060 361 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 C3orf62Q6ZUJ4 267 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 ABRAQ8N0Z2 381 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 TAGAPQ8N103 731 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 TRIML2Q8N7C3 387 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 WDR24Q96S15 920 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 ZSWIM1Q9BR11 485 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 SAGE1Q9NXZ1 904 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 GRID1Q9ULK0 1009 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 ATRNL1Q5VV63 1379 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 NRCAMQ92823 1304 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 LRRIQ3A6PVS8 624 aaPredicted RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 GOLGA8RI6L899 631 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 SRP72O76094 671 aaKnown RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 CYP3A4P08684 503 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 MZF1P28698 734 aaPredicted RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 RARRES1P49788 294 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 CNTN2Q02246 1040 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 PKN1Q16512 942 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 VPS37AQ8NEZ2 397 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 CXorf38Q8TB03 319 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 BRI3BPQ8WY22 251 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 ADGRE3Q9BY15 652 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 ROPN1BQ9BZX4 212 aaPredicted RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 CIPCQ9C0C6 399 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 ROPN1Q9HAT0 212 aaPredicted RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 PDGFCQ9NRA1 345 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 NOP53Q9NZM5 478 aaKnown RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 SLC39A10Q9ULF5 831 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 SNX5Q9Y5X3 404 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 SYCE1LA8MT33 242 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 CRTAMO95727 393 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 CCR1P32246 355 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 ITGA8P53708 1063 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 MED21Q13503 144 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 CUL3Q13618 768 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 PHKG1Q16816 387 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 FAM83EQ2M2I3 478 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 OTOP1Q7RTM1 612 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 C12orf42Q96LP6 360 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 C9orf72Q96LT7 481 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 EIF2AQ9BY44 585 aaKnown RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 ELOVL4Q9GZR5 314 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 CARD9Q9H257 536 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 SRRDQ9UH36 339 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 AP4E1Q9UPM8 1137 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 NCAM2O15394 837 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 EFCAB14O75071 495 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 AP2B1P63010 937 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 CELF3Q5SZQ8 465 aaKnown RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 RETSATQ6NUM9 610 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 SLC13A5Q86YT5 568 aaPredicted RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 TPCN2Q8NHX9 752 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 SGSM3Q96HU1 749 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 UROC1Q96N76 676 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 WWOXQ9NZC7 414 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 DRG1Q9Y295 367 aaKnown RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 GTPBP10A4D1E9 387 aaKnown RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 TRIM66O15016 1216 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 VPS26AO75436 327 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 AKAP5P24588 427 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 HPCAP84074 193 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 POU4F1Q01851 419 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 TP53BP2Q13625 1128 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 INPP5AQ14642 412 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 RGS9BPQ6ZS82 235 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 USP38Q8NB14 1042 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 ENGASEQ8NFI3 743 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 CSGALNACT1Q8TDX6 532 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 TAS1R2Q8TE23 839 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 FAM32AQ9Y421 112 aaKnown RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 ZBTB22O15209 634 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 EEF1DP29692 281 aaKnown RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 CARSP49589 748 aaKnown RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 TOB1P50616 345 aaPredicted RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 PCBP1Q15365 356 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBR4-206ENST00000419533 TFDP3Q5H9I0 405 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 SH3D19Q5HYK7 790 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 NLRP14Q86W24 1093 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 TMEM86AQ8N2M4 240 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 FBXL16Q8N461 479 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 ZNF557Q8N988 423 aaPredicted RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 ARL8AQ96BM9 186 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 POP1Q99575 1024 aaKnown RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 FAM118BQ9BPY3 351 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 UBE2OQ9C0C9 1292 aaKnown RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 ATXN3LQ9H3M9 355 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 INTS13Q9NVM9 706 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 CDYLQ9Y232 598 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 FAM86B1E9PN63 330 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 SLITRK3O94933 977 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 FAM86B2P0C5J1 330 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 TGM2P21980 687 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 YWHAQP27348 245 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 PLA2G4AP47712 749 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 RAP1GDS1P52306 607 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 C6orf10Q5SRN2 563 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 DENND5BQ6ZUT9 1274 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 ST13P4Q8IZP2 240 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms