RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CAPN10Q9HC96 672 aa17.56■□□□□ 0.4
SYNGAP1-202ENST00000418600 Q9Y3F1 56 aa17.56■□□□□ 0.4
SYNGAP1-202ENST00000418600 CDY1Q9Y6F8 540 aa17.56■□□□□ 0.4
SYNGAP1-202ENST00000418600 NDUFB5O43674 189 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 GRIN3AQ8TCU5 1115 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 ARHGEF26Q96DR7 871 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 TFAP2DQ7Z6R9 452 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 LPCAT1Q8NF37 534 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 MYRIPQ8NFW9 859 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 NKX2-4Q9H2Z4 354 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 TSPAN16Q9UKR8 245 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 COPEO14579 308 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 IL1BP01584 269 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 KCNA2P16389 499 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 NRIP1P48552 1158 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 BCL2L1Q07817 233 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 HJURPQ8NCD3 748 aaPredicted RBP17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 DBF4BQ8NFT6 615 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 SLC26A7Q8TE54 656 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 ATXN7L3BQ96GX2 97 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 USP18Q9UMW8 372 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 CRTAMO95727 393 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 EOMESO95936 686 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 PLA2G4AP47712 749 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 PTK6Q13882 451 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 PDE1CQ14123 709 aaPredicted RBP17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 ATG16L1Q676U5 607 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 CCNYL1Q8N7R7 359 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 OR8D1Q8WZ84 308 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 FHOD1Q9Y613 1164 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 ZNF200P98182 395 aaPredicted RBP17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 MTFR1Q15390 333 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 NCLNQ969V3 563 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 TRIM15Q9C019 465 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 SAGE1Q9NXZ1 904 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 RIPK3Q9Y572 518 aa17.55■□□□□ 0.4
SYNGAP1-202ENST00000418600 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 DARSP14868 501 aaKnown RBP17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 TUBP50607 506 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 ARSEP51690 589 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 C18orf25Q96B23 403 aaPredicted RBP17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 CAPS2Q9BXY5 557 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 CFAP97Q9P2B7 532 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 GPSM3Q9Y4H4 160 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 FRMD3A2A2Y4 597 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D4O60343 1298 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 CCT5P48643 541 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 TGM3Q08188 693 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 HIC1Q14526 733 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 TARBP2Q15633 366 aaKnown RBP17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 NAT16Q8N8M0 369 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 TEX12Q9BXU0 123 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 ZNF518BQ9C0D4 1074 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 AAR2Q9Y312 384 aaKnown RBP17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 DYRK1BQ9Y463 629 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 SUPT3HB4E1H0 165 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 PER2O15055 1255 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 SUPT3HO75486 399 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 ZDHHC17Q8IUH5 632 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 NT5MQ9NPB1 228 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 NSMCE4AQ9NXX6 385 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 MAGEC1O60732 1142 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 SF3A3Q12874 501 aaKnown RBP eCLIP17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 CHRDL2Q6WN34 429 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 PPM1NQ8N819 430 aa17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 CHORDC1Q9UHD1 332 aaPredicted RBP17.54■□□□□ 0.4
SYNGAP1-202ENST00000418600 SGPL1O95470 568 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 ATP1A3P13637 1013 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 SARSP49591 514 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 USP4Q13107 963 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 NNTQ13423 1086 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 IL31RAQ8NI17 732 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 C12orf42Q96LP6 360 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 ECT2Q9H8V3 914 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 FANCEQ9HB96 536 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 EML4Q9HC35 981 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 ADAM28Q9UKQ2 775 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 DHPSP49366 369 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 MARSP56192 900 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TMPRSS15P98073 1019 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 PDIA2Q13087 525 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 GRB14Q14449 540 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TSTD1Q8NFU3 115 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 ZFATQ9P243 1243 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 HNRNPCL2B2RXH8 293 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 HNRNPCL1O60812 293 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 STAT4Q14765 748 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 UGP2Q16851 508 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 SH3D19Q5HYK7 790 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 FUT10Q6P4F1 479 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 DDIASQ8IXT1 998 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 C2orf49Q9BVC5 232 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TLR9Q9NR96 1032 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 C6orf203Q9P0P8 240 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 NCK2O43639 380 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 CFIP05156 583 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 GRM5P41594 1212 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 WHAMMQ8TF30 809 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms