RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 KRT35Q92764 455 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 NTAN1Q96AB6 310 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 BTBD6Q96KE9 485 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 KCNK16Q96T55 309 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 RETREG1Q9H6L5 497 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 MRPL17Q9NRX2 175 aaKnown RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 OLA1Q9NTK5 396 aaKnown RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 TMLHEQ9NVH6 421 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 PCYOX1Q9UHG3 505 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 RAB21Q9UL25 225 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 PACSIN2Q9UNF0 486 aaPredicted RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 NR2E3Q9Y5X4 410 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 MRPL42Q9Y6G3 142 aaKnown RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 FNDC1Q4ZHG4 1894 aaPredicted RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 MTMR11A4FU01 709 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 FAM187AA6NFU0 413 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 TMEM110-MUSTN1A8MSY1 372 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 NDC80O14777 642 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 CAPN9O14815 690 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 LTFP02788 710 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 CTSAP10619 480 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 SLC2A3P11169 496 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 IBSPP21815 317 aaPredicted RBP10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 KDELR1P24390 212 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 TNFRSF8P28908 595 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 MIPP30301 263 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 RDXP35241 583 aaKnown RBP10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 FLT3P36888 993 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 GATMP50440 423 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 SCAPQ12770 1279 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 KLF1Q13351 362 aaPredicted RBP10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 PLD1Q13393 1074 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 EIF4EBP2Q13542 120 aaPredicted RBP10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 TFDP2Q14188 446 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 BRD3Q15059 726 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 PSMD5Q16401 504 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 ARL13BQ3SXY8 428 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 RTP2Q5QGT7 225 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 DCAF12L1Q5VU92 463 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 SND1Q7KZF4 910 aaKnown RBP eCLIP10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 OTOP2Q7RTS6 562 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 TADA2BQ86TJ2 420 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 ARFGAP1Q8N6T3 406 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 GRK7Q8WTQ7 553 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 CAPZA3Q96KX2 299 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 MYRFLQ96LU7 910 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 LPIN3Q9BQK8 851 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 ZBED2Q9BTP6 218 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 TTLL2Q9BWV7 592 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 OSBPL8Q9BZF1 889 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 ULBP1Q9BZM6 244 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 TRIM7Q9C029 511 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 GOLPH3Q9H4A6 298 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 ARGLU1Q9NWB6 273 aaPredicted RBP10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 TJP2Q9UDY2 1190 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 CHORDC1Q9UHD1 332 aaPredicted RBP10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 DRG1Q9Y295 367 aaKnown RBP10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 ASB3Q9Y575 518 aa10.56□□□□□ -0.72
HMGA1P6-201ENST00000418454 COL4A4P53420 1690 aaPredicted RBP10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 SOBPA7XYQ1 873 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 F8W810 466 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 PHF2O75151 1096 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 URODP06132 367 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 ACRP10323 421 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 CPB1P15086 417 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 ATP2A2P16615 1042 aaKnown RBP10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 PFKLP17858 780 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 CYP2F1P24903 491 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 YWHAQP27348 245 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 BMPR1AP36894 532 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 NDUFV1P49821 464 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 ARSEP51690 589 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 HDAC4P56524 1084 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 TAS2R40P59535 323 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 RNASE9P60153 205 aaKnown RBP10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 SMC1AQ14683 1233 aaKnown RBP10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 DPYSL2Q16555 572 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 BRMS1LQ5PSV4 323 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 BSPRYQ5W0U4 402 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 LLGL2Q6P1M3 1020 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 KLHDC10Q6PID8 442 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 SPOCD1Q6ZMY3 1216 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 DENND5BQ6ZUT9 1274 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 BZW1Q7L1Q6 419 aaKnown RBP10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 BHLHA9Q7RTU4 235 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 PHLDB2Q86SQ0 1253 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 TCEAL8Q8IYN2 117 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 DEFB106AQ8N104 65 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 KCTD6Q8NC69 237 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 CCHCR1Q8TD31 782 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 FAM172AQ8WUF8 416 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 HDAC7Q8WUI4 952 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 RIN2Q8WYP3 895 aaPredicted RBP10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 SEC14L1Q92503 715 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 TRMT2BQ96GJ1 504 aaKnown RBP10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 MS4A14Q96JA4 679 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 SLITRK1Q96PX8 696 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 CLSTN3Q9BQT9 956 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 ZNF670Q9BS34 389 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms