RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 AKR1B1P15121 316 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ITGAXP20702 1163 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 L1CAMP32004 1257 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 NSFP46459 744 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ALDH3B2P48448 385 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 HSPA13P48723 471 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 GPC3P51654 580 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 KCNQ4P56696 695 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 MRPS5P82675 430 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 BCL2A1Q16548 175 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 BBS9Q3SYG4 887 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 KCTD1Q719H9 257 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 LPCAT2Q7L5N7 544 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 NUDCD3Q8IVD9 361 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 PDIK1LQ8N165 341 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 LZTR1Q8N653 840 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 NT5C1BQ96P26 610 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 AGAP3Q96P47 875 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 NRDE2Q9H7Z3 1164 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 TMEM206Q9H813 350 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 LIN28AQ9H9Z2 209 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 COQ4Q9Y3A0 265 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 HEY1Q9Y5J3 304 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ZHX2Q9Y6X8 837 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 CRKLP46109 303 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ACAP1Q15027 740 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ATP13A4Q4VNC1 1196 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 POTEAQ6S8J7 498 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ADCY4Q8NFM4 1077 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 PPP4R1Q8TF05 950 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 JDP2Q8WYK2 163 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ITPKCQ96DU7 683 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 HSPBP1Q9NZL4 362 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 SQORQ9Y6N5 450 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 FUOMA2VDF0 154 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 K7ENM7 598 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 SIN3BO75182 1162 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 KRT5P13647 590 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 MCCD1P59942 119 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 MAMLD1Q13495 774 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 C6orf52Q5T4I8 152 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 MEX3CQ5U5Q3 659 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 TTC39BQ5VTQ0 682 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 ZSWIM2Q8NEG5 633 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 TSPAN14Q8NG11 270 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC35B2Q8TB61 432 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 LRGUKQ96M69 825 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 RANBP9Q96S59 729 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 KCNK16Q96T55 309 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 MRPL47Q9HD33 250 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 MKS1Q9NXB0 559 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 SELENONQ9NZV5 590 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 RIMS3Q9UJD0 308 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 COQ6Q9Y2Z9 468 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 KAT6AQ92794 2004 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 TRIM49D1C9J1S8 452 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 CYB561D2O14569 222 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 ADAM23O75077 832 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 TMEM63AO94886 807 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 KRT1P04264 644 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 PTPN7P35236 360 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 MTM1Q13496 603 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 LIN9Q5TKA1 542 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 KRT39Q6A163 491 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 OLFML1Q6UWY5 402 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 DPP8Q6V1X1 898 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 SPOCD1Q6ZMY3 1216 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 WDR75Q8IWA0 830 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 DAW1Q8N136 415 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 CYP2W1Q8TAV3 490 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 TRPC4APQ8TEL6 797 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 RPGRQ92834 1020 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 CMTM5Q96DZ9 223 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 INO80BQ9C086 356 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 TUT1Q9H6E5 874 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 XAB2Q9HCS7 855 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 THAP1Q9NVV9 213 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 IGSF9Q9P2J2 1179 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 FAM32AQ9Y421 112 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 SIPA1L1O43166 1804 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 ECE1P42892 770 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 SIK1P57059 783 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 CDKL1Q00532 357 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 STX3Q13277 289 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF423Q2M1K9 1284 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 PLA2G4FQ68DD2 849 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNF677Q86XU0 584 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 IGDCC3Q8IVU1 814 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 TMIGD2Q96BF3 282 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 PPP1R10Q96QC0 940 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 CSRNP1Q96S65 589 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 TBC1D23Q9NUY8 699 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 ZNRF3Q9ULT6 936 aa8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 APOBEC2Q9Y235 224 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-202ENST00000418170 hCG_1818297A0A087WSY0 165 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TCRBV7S3A2A0A539 114 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 TRPA1O75762 1119 aa8.31□□□□□ -1.08
HMGXB4-202ENST00000418170 CAPNS1P04632 268 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms