RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MCOLN2Q8IZK6 566 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 TTC16Q8NEE8 873 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 OVCA2Q8WZ82 227 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 IRGQQ8WZA9 623 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 VCPIP1Q96JH7 1222 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CDK5RAP1Q96SZ6 601 aaKnown RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 EIF3CQ99613 913 aaKnown RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 SLC4A5Q9BY07 1137 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 MRPL47Q9HD33 250 aaKnown RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 METTL5Q9NRN9 209 aaKnown RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 TMEM30AQ9NV96 361 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CTTNBP2NLQ9P2B4 639 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CNOT8Q9UFF9 292 aaKnown RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CYTH4Q9UIA0 394 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 COG5Q9UP83 839 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 SCML2Q9UQR0 700 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 C2orf16Q68DN1 1984 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 MYO7AQ13402 2215 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 PRRC2BQ5JSZ5 2229 aaKnown RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CLUHO75153 1309 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 A0A1W2PQH9 124 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 A0A1W2PRU2 124 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 HHLA1C9JL84 531 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 TNFRSF10BO14763 440 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 HSF2BPO75031 334 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 GRAP2O75791 330 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CKMP06732 381 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 POU2F2P09086 479 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 NCAM1P13591 858 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 FSHRP23945 695 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 DDX6P26196 483 aaKnown RBP eCLIP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 GBP2P32456 591 aaPredicted RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 GALCP54803 685 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 USP46P62068 366 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 GPC5P78333 572 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CYP4F8P98187 520 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 SLC6A3Q01959 620 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 ZNF268Q14587 947 aaPredicted RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 MTF1Q14872 753 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 RAB41Q5JT25 222 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 C10orf120Q5SQS8 335 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 MON1BQ7L1V2 547 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 GPR149Q86SP6 731 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 TMEM110Q86TL2 294 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 MON1AQ86VX9 555 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 XYLT1Q86Y38 959 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 HS6ST3Q8IZP7 471 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 WDTC1Q8N5D0 677 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CLEC4CQ8WTT0 213 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 ING5Q8WYH8 240 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 NECTIN4Q96NY8 510 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 PPP1R9BQ96SB3 815 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 TTLL2Q9BWV7 592 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 ADAM7Q9H2U9 754 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 FAM204AQ9H8W3 233 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 POPDC2Q9HBU9 364 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 ZNF334Q9HCZ1 680 aaPredicted RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 ABCC13Q9NSE7 274 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 OLA1Q9NTK5 396 aaKnown RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 PARVAQ9NVD7 372 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 TAS2R14Q9NYV8 317 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 DNMT3BQ9UBC3 853 aaKnown RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CHORDC1Q9UHD1 332 aaPredicted RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 RASAL2Q9UJF2 1139 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 STAP1Q9ULZ2 295 aa8.88□□□□□ -0.99
TRIM48-201ENST00000417545 RANBP2P49792 3224 aaKnown RBP8.88□□□□□ -0.99
TRIM48-201ENST00000417545 CHD9Q3L8U1 2897 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 OBSL1O75147 1896 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 TRAV19A0A0A6YYK7 116 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 DPYSL4O14531 572 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 PAPSS1O43252 624 aaPredicted RBP8.87□□□□□ -0.99
TRIM48-201ENST00000417545 DAB1O75553 588 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 GLI1P08151 1106 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 CCDC175P0C221 793 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 TMEM253P0C7T8 217 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 MBL2P11226 248 aaPredicted RBP8.87□□□□□ -0.99
TRIM48-201ENST00000417545 KRT3P12035 628 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 RARGP13631 454 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 FECHP22830 423 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 RRM1P23921 792 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 SDC4P31431 198 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 GBP1P32455 592 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 AVPR1AP37288 418 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 NOP2P46087 812 aaKnown RBP8.87□□□□□ -0.99
TRIM48-201ENST00000417545 YWHAZP63104 245 aaKnown RBP8.87□□□□□ -0.99
TRIM48-201ENST00000417545 NTHL1P78549 312 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 KIF5AQ12840 1032 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 KCNC3Q14003 757 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 DCAF6Q58WW2 860 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 HECTD3Q5T447 861 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 GPR158Q5T848 1215 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 BSPRYQ5W0U4 402 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 SYCE2Q6PIF2 218 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 RAD9BQ6WBX8 426 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 SND1Q7KZF4 910 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRIM48-201ENST00000417545 DNAAF5Q86Y56 855 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 SCML4Q8N228 414 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 C3orf20Q8ND61 904 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 ACRBPQ8NEB7 543 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 NDRG1Q92597 394 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms