RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 GMIPQ9P107 970 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 HMGXB4Q9UGU5 601 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 SCML2Q9UQR0 700 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 SH3BP1Q9Y3L3 701 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 PCDHA5Q9Y5H7 936 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 DMXL1Q9Y485 3027 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 MYO16Q9Y6X6 1858 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 MYO18AQ92614 2054 aaKnown RBP19.47■□□□□ 0.71
VPS16-204ENST00000417508 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.47■□□□□ 0.71
VPS16-204ENST00000417508 CILPO75339 1184 aa19.47■□□□□ 0.71
VPS16-204ENST00000417508 SMC2O95347 1197 aa19.47■□□□□ 0.71
VPS16-204ENST00000417508 APODP05090 189 aa19.47■□□□□ 0.71
VPS16-204ENST00000417508 EPB41P11171 864 aaKnown RBP19.47■□□□□ 0.71
VPS16-204ENST00000417508 PXNP49023 591 aaPredicted RBP19.47■□□□□ 0.71
VPS16-204ENST00000417508 ATXN1P54253 815 aaKnown RBP19.47■□□□□ 0.71
VPS16-204ENST00000417508 GAD2Q05329 585 aa19.47■□□□□ 0.71
VPS16-204ENST00000417508 NETO1Q8TDF5 533 aa19.47■□□□□ 0.71
VPS16-204ENST00000417508 CCSER2Q9H7U1 834 aa19.47■□□□□ 0.71
VPS16-204ENST00000417508 HOOK1Q9UJC3 728 aaKnown RBP19.47■□□□□ 0.71
VPS16-204ENST00000417508 DCHS1Q96JQ0 3298 aa19.47■□□□□ 0.71
VPS16-204ENST00000417508 TLR5O60602 858 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 ADH5P11766 374 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 ADORA2BP29275 332 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 HOXC13P31276 330 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 ATP5C1P36542 298 aaKnown RBP19.46■□□□□ 0.71
VPS16-204ENST00000417508 GRIA2P42262 883 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 TNFRSF4P43489 277 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 ORC1Q13415 861 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 PNOCQ13519 176 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 ZNF658Q5TYW1 1059 aaPredicted RBP19.46■□□□□ 0.71
VPS16-204ENST00000417508 BTBD8Q5XKL5 378 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 KLHDC10Q6PID8 442 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 PRR23CQ6ZRP0 262 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 CLEC20AQ6ZU45 233 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 NUDT18Q6ZVK8 323 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 HTR3DQ70Z44 454 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 ZNF276Q8N554 614 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 FBXL13Q8NEE6 735 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 WHAMMQ8TF30 809 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 TIGD1Q96MW7 591 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 HHIPQ96QV1 700 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 TWNKQ96RR1 684 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 TSG101Q99816 390 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 CYLDQ9NQC7 956 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 PCDHGA5Q9Y5G8 931 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 EML5Q05BV3 1969 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 KIAA1549LQ6ZVL6 1849 aa19.46■□□□□ 0.71
VPS16-204ENST00000417508 KAT7O95251 611 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 PRCPP42785 496 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 PSEN1P49768 467 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 FKBP3Q00688 224 aaKnown RBP19.45■□□□□ 0.7
VPS16-204ENST00000417508 GOLGA8FQ08AF8 430 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 GOLGA8DPQ0D2H9 430 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 C2orf27AQ580R0 203 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 LY6G5CQ5SRR4 150 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 C11orf74Q86VG3 221 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 ENGASEQ8NFI3 743 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 TSTD1Q8NFU3 115 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 SPATA20Q8TB22 786 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 KCNV2Q8TDN2 545 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 DUSP16Q9BY84 665 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 UBXN6Q9BZV1 441 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 MMRN2Q9H8L6 949 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 RAB20Q9NX57 234 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 MMP17Q9ULZ9 603 aa19.45■□□□□ 0.7
VPS16-204ENST00000417508 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.45■□□□□ 0.7
VPS16-204ENST00000417508 HHLA1C9JL84 531 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 SLC16A3O15427 465 aaKnown RBP19.44■□□□□ 0.7
VPS16-204ENST00000417508 HOXC11O43248 304 aaPredicted RBP19.44■□□□□ 0.7
VPS16-204ENST00000417508 RHOBTB1O94844 696 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 EPN2O95208 641 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 ZNF806P0C7X5 589 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 CD58P19256 250 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 ACO1P21399 889 aaKnown RBP19.44■□□□□ 0.7
VPS16-204ENST00000417508 SLC6A11P48066 632 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 MXI1P50539 228 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 DGKEP52429 567 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 KIF11P52732 1056 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 USP39Q53GS9 565 aaKnown RBP19.44■□□□□ 0.7
VPS16-204ENST00000417508 TADA2BQ86TJ2 420 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 KBTBD6Q86V97 674 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 ELOA2Q8IYF1 753 aaPredicted RBP19.44■□□□□ 0.7
VPS16-204ENST00000417508 HEXIM2Q96MH2 286 aaKnown RBP19.44■□□□□ 0.7
VPS16-204ENST00000417508 KLF16Q9BXK1 252 aaPredicted RBP19.44■□□□□ 0.7
VPS16-204ENST00000417508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.44■□□□□ 0.71e-9■■■■■ 76.9
VPS16-204ENST00000417508 ARHGEF4Q9NR80 690 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 SPHK2Q9NRA0 654 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 POLR3BQ9NW08 1133 aaPredicted RBP19.44■□□□□ 0.7
VPS16-204ENST00000417508 SPTBN2O15020 2390 aa19.44■□□□□ 0.7
VPS16-204ENST00000417508 SLC30A4O14863 429 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 PLA2G4AP47712 749 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 SEC13P55735 322 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 LRRC63Q05C16 580 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 ELF2Q15723 593 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 CRY1Q16526 586 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 PLK5Q496M5 336 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 BBS7Q8IWZ6 715 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 ZC3H3Q8IXZ2 948 aaKnown RBP19.43■□□□□ 0.7
VPS16-204ENST00000417508 SMYD4Q8IYR2 804 aaPredicted RBP19.43■□□□□ 0.7
VPS16-204ENST00000417508 SEMA4DQ92854 862 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms