RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 AP1G2O75843 785 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 BEST1O76090 585 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 CLSTN1O94985 981 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 PDIA4P13667 645 aaKnown RBP15.7■□□□□ 0.1
RPS28-201ENST00000417088 P2RY2P41231 377 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 TNFRSF4P43489 277 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 TUBP50607 506 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 SHC2P98077 582 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 GAD2Q05329 585 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 ZACNQ401N2 412 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 EOGTQ5NDL2 527 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 ATL3Q6DD88 541 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 CYP2U1Q7Z449 544 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 BBS7Q8IWZ6 715 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 ETFBKMTQ8IXQ9 262 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 RLN3Q8WXF3 142 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 DUSP9Q99956 384 aaKnown RBP15.7■□□□□ 0.1
RPS28-201ENST00000417088 KCTD10Q9H3F6 313 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 POLMQ9NP87 494 aaPredicted RBP15.7■□□□□ 0.1
RPS28-201ENST00000417088 KRT82Q9NSB4 513 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 EXOC1Q9NV70 894 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 RCOR1Q9UKL0 485 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 SH3BP1Q9Y3L3 701 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 NUP205Q92621 2012 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 GON4LQ3T8J9 2241 aa15.7■□□□□ 0.1
RPS28-201ENST00000417088 PATE3B3GLJ2 98 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 KHNYNO15037 678 aaKnown RBP15.69■□□□□ 0.1
RPS28-201ENST00000417088 ADAM23O75077 832 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 CCDC130P13994 396 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 DHPSP49366 369 aaPredicted RBP15.69■□□□□ 0.1
RPS28-201ENST00000417088 PGFP49763 221 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 NDST1P52848 882 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 DNM1Q05193 864 aaKnown RBP15.69■□□□□ 0.1
RPS28-201ENST00000417088 ORC1Q13415 861 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 PKP1Q13835 747 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 SGSM1Q2NKQ1 1148 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 KMT5BQ4FZB7 885 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 PSAPL1Q6NUJ1 521 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 SV2AQ7L0J3 742 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 TMEM25Q86YD3 366 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 CRYBG2Q8N1P7 616 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 FRMD1Q8N878 549 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 NAT16Q8N8M0 369 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 SLC2A14Q8TDB8 520 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 TMC2Q8TDI7 906 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 WHAMMQ8TF30 809 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 PAGE5Q96GU1 130 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 CSNK1G1Q9HCP0 422 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 SPHK2Q9NRA0 654 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 HMGXB4Q9UGU5 601 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 CFAP45Q9UL16 551 aa15.69■□□□□ 0.1
RPS28-201ENST00000417088 MYO18AQ92614 2054 aaKnown RBP15.69■□□□□ 0.1
RPS28-201ENST00000417088 TBC1D3BA6NDS4 549 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 PDXKO00764 312 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 CDX4O14627 284 aaPredicted RBP15.68■□□□□ 0.1
RPS28-201ENST00000417088 TLR5O60602 858 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 TULP3O75386 442 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 NR3C1P04150 777 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 RPN1P04843 607 aaKnown RBP15.68■□□□□ 0.1
RPS28-201ENST00000417088 IRF1P10914 325 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 P4HA1P13674 534 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 MAP3K7CLP57077 242 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 IRX4P78413 519 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 DAB2IPQ5VWQ8 1189 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 BTBD8Q5XKL5 378 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 SPOPLQ6IQ16 392 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 UNC93AQ86WB7 457 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 C12orf29Q8N999 325 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 PIGKQ92643 395 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 TAF4BQ92750 862 aa15.68■□□□□ 0.1
RPS28-201ENST00000417088 MBD1Q9UIS9 605 aaPredicted RBP15.68■□□□□ 0.1
RPS28-201ENST00000417088 CIZ1Q9ULV3 898 aaPredicted RBP15.68■□□□□ 0.1
RPS28-201ENST00000417088 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 TCRBV21S2A2A0A5A6 115 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 GIPC1O14908 333 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 TRIM24O15164 1050 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 GREM1O60565 184 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 TBX18O95935 607 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 ASS1P00966 412 aaKnown RBP15.67■□□□□ 0.1
RPS28-201ENST00000417088 ASPAP45381 313 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 NOVA1P51513 510 aaKnown RBP15.67■□□□□ 0.1
RPS28-201ENST00000417088 MAP7D1Q3KQU3 841 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 C1orf220Q5T0J3 134 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 HTR3DQ70Z44 454 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 LPCAT2Q7L5N7 544 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 TMEFF1Q8IYR6 380 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 HMGB4Q8WW32 186 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 SPACA7Q96KW9 195 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 KLF16Q9BXK1 252 aaPredicted RBP15.67■□□□□ 0.1
RPS28-201ENST00000417088 NACA2Q9H009 215 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 FBXO44Q9H4M3 255 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 TMEM9BQ9NQ34 198 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 FAM49BQ9NUQ9 324 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 BCCIPQ9P287 314 aaKnown RBP eCLIP15.67■□□□□ 0.1
RPS28-201ENST00000417088 DEC1Q9P2X7 70 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 HCN2Q9UL51 889 aa15.67■□□□□ 0.1
RPS28-201ENST00000417088 IKBKBO14920 756 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 MAP3K13O43283 966 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 HLA-DRAP01903 254 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 HSP90AA1P07900 732 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms