RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CLIC4Q9Y696 253 aa10.66□□□□□ -0.7
MDC1-202ENST00000416571 NBEAQ8NFP9 2946 aa10.66□□□□□ -0.7
MDC1-202ENST00000416571 A8MXQ7 604 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 ARHGAP33O14559 1287 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 COCHO43405 550 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 ZNF217O75362 1048 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 TULP3O75386 442 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 TACC1O75410 805 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 DLATP10515 647 aaKnown RBP10.65□□□□□ -0.7
MDC1-202ENST00000416571 GABRG2P18507 467 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 NTSR1P30989 418 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 WASP42768 502 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 CEBPZQ03701 1054 aaKnown RBP10.65□□□□□ -0.7
MDC1-202ENST00000416571 TRPC3Q13507 836 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 WDR72Q3MJ13 1102 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 HECTD3Q5T447 861 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 ERICH6BQ5W0A0 696 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 RGL4Q8IZJ4 473 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 CHCHD4Q8N4Q1 142 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 TERB1Q8NA31 727 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 RDH13Q8NBN7 331 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 OVCA2Q8WZ82 227 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 MED10Q9BTT4 135 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 PANK2Q9BZ23 570 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 ZNF518BQ9C0D4 1074 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 SPHK2Q9NRA0 654 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 HSPBP1Q9NZL4 362 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 SUSD2Q9UGT4 822 aa10.65□□□□□ -0.7
MDC1-202ENST00000416571 AKAP13Q12802 2813 aa10.65□□□□□ -0.71
MDC1-202ENST00000416571 PCNX2A6NKB5 2137 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 MYO18AQ92614 2054 aaKnown RBP10.64□□□□□ -0.71
MDC1-202ENST00000416571 GON4LQ3T8J9 2241 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 FRMD3A2A2Y4 597 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 CLDN5O00501 218 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 HOXC11O43248 304 aaPredicted RBP10.64□□□□□ -0.71
MDC1-202ENST00000416571 NDUFS2O75306 463 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 FAM163BP0C2L3 166 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 IRF1P10914 325 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 CHRM1P11229 460 aaPredicted RBP10.64□□□□□ -0.71
MDC1-202ENST00000416571 GNSP15586 552 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 CACNA2D1P54289 1103 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 SNRNP35Q16560 246 aaKnown RBP10.64□□□□□ -0.71
MDC1-202ENST00000416571 GRAMD4Q6IC98 578 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 ETFBKMTQ8IXQ9 262 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 CHPFQ8IZ52 775 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 PHTF2Q8N3S3 785 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 B3GALNT2Q8NCR0 500 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 SCFD1Q8WVM8 642 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 CCDC127Q96BQ5 260 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 HSPA12BQ96MM6 686 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 CLIC6Q96NY7 704 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 XPO6Q96QU8 1125 aaKnown RBP10.64□□□□□ -0.71
MDC1-202ENST00000416571 LRRC27Q9C0I9 530 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 DPEP3Q9H4B8 488 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 UPF2Q9HAU5 1272 aaKnown RBP10.64□□□□□ -0.71
MDC1-202ENST00000416571 CAPN10Q9HC96 672 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 DNAJC17Q9NVM6 304 aaKnown RBP10.64□□□□□ -0.71
MDC1-202ENST00000416571 NXF1Q9UBU9 619 aaKnown RBP10.64□□□□□ -0.71
MDC1-202ENST00000416571 CHORDC1Q9UHD1 332 aaPredicted RBP10.64□□□□□ -0.71
MDC1-202ENST00000416571 CYP8B1Q9UNU6 501 aa10.64□□□□□ -0.71
MDC1-202ENST00000416571 PCDH15Q96QU1 1955 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 IGHV1OR15-9A0A0B4J2B8 117 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 A0A1W2PQD8 194 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 PHACTR2O75167 634 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 CD2BP2O95400 341 aaKnown RBP10.63□□□□□ -0.71
MDC1-202ENST00000416571 CST3P01034 146 aaPredicted RBP10.63□□□□□ -0.71
MDC1-202ENST00000416571 PDCP20941 246 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 TUBP50607 506 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 SLC5A3P53794 718 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 GOLGA8FQ08AF8 430 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 GOLGA8DPQ0D2H9 430 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 SLC14A1Q13336 389 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 TRIP6Q15654 476 aaKnown RBP10.63□□□□□ -0.71
MDC1-202ENST00000416571 PLEKHG6Q3KR16 790 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 C8orf34Q49A92 452 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 SYCP2LQ5T4T6 812 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 PROSER1Q86XN7 944 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 TMEM25Q86YD3 366 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 BBS7Q8IWZ6 715 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 PDILTQ8N807 584 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 TRIML1Q8N9V2 468 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 OR2I1PQ8NGU4 316 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 SYAP1Q96A49 352 aaPredicted RBP10.63□□□□□ -0.71
MDC1-202ENST00000416571 ERLEC1Q96DZ1 483 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 TNIP3Q96KP6 325 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 CGRRF1Q99675 332 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 B3GNT5Q9BYG0 378 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 FAM124BQ9H5Z6 455 aaPredicted RBP10.63□□□□□ -0.71
MDC1-202ENST00000416571 CCSER2Q9H7U1 834 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 DMAP1Q9NPF5 467 aaPredicted RBP10.63□□□□□ -0.71
MDC1-202ENST00000416571 DNAAF2Q9NVR5 837 aaKnown RBP10.63□□□□□ -0.71
MDC1-202ENST00000416571 CACNA1EQ15878 2313 aa10.63□□□□□ -0.71
MDC1-202ENST00000416571 FAM221BA6H8Z2 402 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 NEDD8-MDP1E9PL57 170 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 EIF3DO15371 548 aaKnown RBP eCLIP10.62□□□□□ -0.71
MDC1-202ENST00000416571 CD59P13987 128 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 NDUFV2P19404 249 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 ATICP31939 592 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 CYP2J2P51589 502 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 FAM193AP78312 1265 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms