RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HNRNPDLO14979 420 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 MEFVO15553 781 aaPredicted RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 TSPAN6O43657 245 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 PRPF6O94906 941 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 GCNT3O95395 438 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 GALTP07902 379 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 MYBP10242 640 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 PFKFB1P16118 471 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 BPIP17213 487 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 NAT1P18440 290 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 IGFBP6P24592 240 aaPredicted RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 ANP32AP39687 249 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 TNFSF9P41273 254 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 KIR3DL1P43629 444 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 NOP2P46087 812 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 ID4P47928 161 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 NRIP1P48552 1158 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 ALDH7A1P49419 539 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 LIG4P49917 911 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 KCNQ1P51787 676 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 CASP5P51878 434 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 ZNF131P52739 623 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 GPR85P60893 370 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 ASIC1P78348 528 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 HYAL1Q12794 435 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 COASYQ13057 564 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 CUL4BQ13620 913 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 NOLC1Q14978 699 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS41-205ENST00000414632 DCAF4L1Q3SXM0 396 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 TIGD5Q53EQ6 642 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 HERC4Q5GLZ8 1057 aaPredicted RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 ZBTB41Q5SVQ8 909 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 SLC39A4Q6P5W5 647 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 CRTC3Q6UUV7 619 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 MPZL3Q6UWV2 235 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 RSPO2Q6UXX9 243 aaPredicted RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 BEND4Q6ZU67 534 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 TAS1R1Q7RTX1 841 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 MTDHQ86UE4 582 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 SPATS2Q86XZ4 545 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 KIF18BQ86Y91 864 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 WDR75Q8IWA0 830 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 COLGALT2Q8IYK4 626 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 HACE1Q8IYU2 909 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 SLC39A11Q8N1S5 342 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 FSIP1Q8NA03 581 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 CNNM3Q8NE01 707 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 ENOX1Q8TC92 643 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 MRPS27Q92552 414 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 P2RX5Q93086 422 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 TMEM169Q96HH4 297 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 C8orf48Q96LL4 319 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 HEXIM2Q96MH2 286 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 FCRL3Q96P31 734 aaPredicted RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 FIZ1Q96SL8 496 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 TCF25Q9BQ70 676 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 APOL5Q9BWW9 433 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 VN1R3Q9BXE9 311 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 NSUN3Q9H649 340 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 MRPL44Q9H9J2 332 aaKnown RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 GOLGA2P5Q9HBQ8 144 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 TLR9Q9NR96 1032 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 GPR27Q9NS67 375 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 PANK4Q9NVE7 773 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 MARCH5Q9NX47 278 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 CLDND1Q9NY35 253 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 SPG21Q9NZD8 308 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 KCND2Q9NZV8 630 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 THEGQ9P2T0 379 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 TMEFF2Q9UIK5 374 aaPredicted RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 TBX20Q9UMR3 447 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 TNFSF13BQ9Y275 285 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 GIT1Q9Y2X7 761 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 NPFFR2Q9Y5X5 522 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 BACE2Q9Y5Z0 518 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 MORC2Q9Y6X9 1032 aaPredicted RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 SCN1AP35498 2009 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 I3L4J1 428 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 CLDN3O15551 220 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 TOM1L1O75674 476 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 CXCL8P10145 99 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 MCF2P10911 925 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 IFNGR1P15260 489 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 GAP43P17677 238 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 KCNA5P22460 613 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 PROZP22891 400 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 LTBRP36941 435 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ACOT2P49753 483 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 SEPHS1P49903 392 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 NEK2P51955 445 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 NDUFA8P51970 172 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 NUCB2P80303 420 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 TMPRSS15P98073 1019 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 GTF2BQ00403 316 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 DLX2Q07687 328 aaPredicted RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 TNK2Q07912 1038 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 GRIK3Q13003 919 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ACBD5Q5T8D3 534 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms