RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 STAT5AP42229 794 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 MAGEA9P43362 315 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 RANBP1P43487 201 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ACADSBP45954 432 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CBX5P45973 191 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 OR1G1P47890 313 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CEBPAP49715 358 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 STAT5BP51692 787 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 MRPL12P52815 198 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 GSTO1P78417 241 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 EXOSC9Q06265 439 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 NIPAL4Q0D2K0 466 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 COASYQ13057 564 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 BMPR2Q13873 1038 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ERV3-1Q14264 604 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SQLEQ14534 574 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 EFTUD2Q15029 972 aaKnown RBP eCLIP3.83□□□□□ -1.82e-6■■□□□ 13.7
SF3B1-203ENST00000414174 NCF4Q15080 339 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PCBP1Q15365 356 aaKnown RBP eCLIP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 HS1BP3Q53T59 392 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 FAM47CQ5HY64 1035 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 TOR1AIP1Q5JTV8 583 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 BEND6Q5SZJ8 279 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 IFIT1BQ5T764 474 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 OLFML2BQ68BL8 750 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ATL3Q6DD88 541 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 DENND5AQ6IQ26 1287 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 WDR93Q6P2C0 686 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM53Q6P2H8 277 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 TUBA3EQ6PEY2 450 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 DCLRE1AQ6PJP8 1040 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PTCHD4Q6ZW05 846 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PIWIL3Q7Z3Z3 882 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ARHGAP22Q7Z5H3 698 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 TMC3Q7Z5M5 1100 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 GPR142Q7Z601 462 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 FRMD5Q7Z6J6 570 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SLFN11Q7Z7L1 901 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF605Q86T29 641 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 KIAA1328Q86T90 577 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 FAM83AQ86UY5 434 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CABP7Q86V35 215 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 FAM160B2Q86V87 743 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM200AQ86VY9 491 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CDH26Q8IXH8 852 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SLC15A3Q8IY34 581 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PHACTR4Q8IZ21 702 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CACNA2D3Q8IZS8 1091 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 KRT78Q8N1N4 520 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 FAM156AQ8NDB6 213 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 LPCAT1Q8NF37 534 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 FBXO18Q8NFZ0 1043 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CDC26Q8NHZ8 85 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SH3RF3Q8TEJ3 882 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CREB3L4Q8TEY5 395 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 DDI1Q8WTU0 396 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SEPT1Q8WYJ6 367 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SLC47A1Q96FL8 570 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PPP1R10Q96QC0 940 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SECISBP2Q96T21 854 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 GPR20Q99678 358 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 TSG101Q99816 390 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 NUSAP1Q9BXS6 441 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 NFKBIZQ9BYH8 718 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 TRIM4Q9C037 500 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 MTMR12Q9C0I1 747 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 REXO4Q9GZR2 422 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ZCWPW1Q9H0M4 648 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 DPH5Q9H2P9 285 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 IFT22Q9H7X7 185 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 FAM204AQ9H8W3 233 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ZMAT3Q9HA38 289 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 KCNK13Q9HB14 408 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SCPEP1Q9HB40 452 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 POLE3Q9NRF9 147 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ZBTB40Q9NUA8 1239 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ATAD3AQ9NVI7 634 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 GPATCH2Q9NW75 528 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 UCKL1Q9NWZ5 548 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 GMIPQ9P107 970 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 SUCOQ9UBS9 1254 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PAIP2BQ9ULR5 123 aaKnown RBP3.83□□□□□ -1.8
SF3B1-203ENST00000414174 DDX19BQ9UMR2 479 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 MINPP1Q9UNW1 487 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 POLHQ9Y253 713 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CBY1Q9Y3M2 126 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PCDHB4Q9Y5E5 795 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 MRFAP1Q9Y605 127 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 CAPN7Q9Y6W3 813 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 PTPRGP23470 1445 aa3.83□□□□□ -1.8
SF3B1-203ENST00000414174 ATP8B3O60423 1300 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 MAPK8IP3Q9UPT6 1336 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CYP3A7-CYP3A51PA0A087WV96 503 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 A0A1B0GUA9 196 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM82A0PJX8 343 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 HEATR9A2RTY3 570 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 CCDC162PA2VCL2 907 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 LRRIQ3A6PVS8 624 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-203ENST00000414174 B2RBV5 119 aa3.82□□□□□ -1.8
SF3B1-203ENST00000414174 EIF3CLB5ME19 914 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms