RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ARCQ7LC44 396 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 XYLT1Q86Y38 959 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 NUDCD3Q8IVD9 361 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 CTAGE3PQ8IX95 158 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 SLC4A11Q8NBS3 891 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 LRRC39Q96DD0 335 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 RTP4Q96DX8 246 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 CFAP36Q96G28 342 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 LBHD1Q9BQE6 289 aaPredicted RBP18.33■□□□□ 0.52
SDCBP-202ENST00000413219 THTPAQ9BU02 230 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 ZDHHC7Q9NXF8 308 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 HBS1LQ9Y450 684 aaKnown RBP18.33■□□□□ 0.52
SDCBP-202ENST00000413219 TELO2Q9Y4R8 837 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 FAM189A1O60320 539 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 CSDE1O75534 798 aaKnown RBP18.32■□□□□ 0.52
SDCBP-202ENST00000413219 RNF8O76064 485 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 AOC1P19801 751 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 MAGEA6P43360 314 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 AQP5P55064 265 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 C1orf146Q5VVC0 180 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 FLAD1Q8NFF5 587 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 NCSTNQ92542 709 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 MECRQ9BV79 373 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 MTMR12Q9C0I1 747 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 POPDC2Q9HBU9 364 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 MAFBQ9Y5Q3 323 aaPredicted RBP18.32■□□□□ 0.52
SDCBP-202ENST00000413219 SLC4A7Q9Y6M7 1214 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 SPATA31C2B4DYI2 1134 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 VWA5AO00534 786 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 UBTFL6P0CB48 400 aaPredicted RBP18.32■□□□□ 0.52
SDCBP-202ENST00000413219 RPS6KA3P51812 740 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 CNTN2Q02246 1040 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 SP4Q02446 784 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 KDSRQ06136 332 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 TRPC3Q13507 836 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 SEZ6Q53EL9 994 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 CCNJLQ8IV13 435 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 SLC7A3Q8WY07 619 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 CALN1Q9BXU9 219 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 STN1Q9H668 368 aaKnown RBP18.32■□□□□ 0.52
SDCBP-202ENST00000413219 DMAP1Q9NPF5 467 aaPredicted RBP18.32■□□□□ 0.52
SDCBP-202ENST00000413219 ASNSD1Q9NWL6 643 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 ZC3H7BQ9UGR2 993 aaKnown RBP18.32■□□□□ 0.52
SDCBP-202ENST00000413219 CYTH4Q9UIA0 394 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 USP18Q9UMW8 372 aa18.32■□□□□ 0.52
SDCBP-202ENST00000413219 ADCY3O60266 1144 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 BPGMP07738 259 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 CRHR1P34998 444 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 ASPAP45381 313 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 CDC16Q13042 620 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 PDCD2Q16342 344 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-202ENST00000413219 ZNF699Q32M78 642 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 CES4AQ5XG92 561 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 RFX8Q6ZV50 586 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.31■□□□□ 0.52
SDCBP-202ENST00000413219 HSPH1Q92598 858 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 NIFKQ9BYG3 293 aaKnown RBP18.31■□□□□ 0.52
SDCBP-202ENST00000413219 PCSK1NQ9UHG2 260 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 SOX13Q9UN79 622 aa18.31■□□□□ 0.52
SDCBP-202ENST00000413219 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 SDR42E2A6NKP2 422 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 BUD23O43709 281 aaKnown RBP18.3■□□□□ 0.52
SDCBP-202ENST00000413219 PIM1P11309 404 aaPredicted RBP18.3■□□□□ 0.52
SDCBP-202ENST00000413219 HARSP12081 509 aaKnown RBP18.3■□□□□ 0.52
SDCBP-202ENST00000413219 OSBPP22059 807 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 TNFSF9P41273 254 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 SERPINB9P50453 376 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 CDK7P50613 346 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 CUL3Q13618 768 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 STXBP5Q5T5C0 1151 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 ACAD11Q709F0 780 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 MCRS1Q96EZ8 462 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 GORASP1Q9BQQ3 440 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 USP29Q9HBJ7 922 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 ZNF302Q9NR11 478 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 RAB6BQ9NRW1 208 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 TJP2Q9UDY2 1190 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 TBC1D30Q9Y2I9 924 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 CXorf49A8MYA2 514 aaPredicted RBP18.3■□□□□ 0.52
SDCBP-202ENST00000413219 TOM1L1O75674 476 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 APOEP02649 317 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 CPOXP36551 454 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 GABRB2P47870 512 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 XIAPP98170 497 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 STX3Q13277 289 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 EMC1Q8N766 993 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 MCUQ8NE86 351 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 CLPTM1LQ96KA5 538 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 OLFM3Q96PB7 478 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 CPXM1Q96SM3 734 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 CENPKQ9BS16 269 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 SDCBP2Q9H190 292 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 XYLT2Q9H1B5 865 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 VCX3BQ9H321 246 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 RPAP3Q9H6T3 665 aaPredicted RBP18.3■□□□□ 0.52
SDCBP-202ENST00000413219 THAP1Q9NVV9 213 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 RIPK3Q9Y572 518 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 KIAA1217Q5T5P2 1943 aa18.3■□□□□ 0.52
SDCBP-202ENST00000413219 A0A088AWK7 358 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms