RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 DEFB106AQ8N104 65 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 SLC39A11Q8N1S5 342 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 SCML4Q8N228 414 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 COLGALT1Q8NBJ5 622 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 CCDC26Q8TAB7 109 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 C2orf15Q8WU43 125 aaKnown RBP12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 FAM172AQ8WUF8 416 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 BCL7CQ8WUZ0 217 aaPredicted RBP12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 RUBCNQ92622 972 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 RNF25Q96BH1 459 aaPredicted RBP12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 RUNDC3BQ96NL0 473 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 DDX23Q9BUQ8 820 aaKnown RBP12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 HERC2P3Q9BVR0 1158 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 COL25A1Q9BXS0 654 aaPredicted RBP12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 SLITRK6Q9H5Y7 841 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 POPDC2Q9HBU9 364 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 KLHL11Q9NVR0 708 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 PCSK1NQ9UHG2 260 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 USP18Q9UMW8 372 aa12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 MRPL42Q9Y6G3 142 aaKnown RBP12.15□□□□□ -0.46
SNRNP35-202ENST00000412157 MTMR11A4FU01 709 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 FSCN2O14926 492 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 PHF2O75151 1096 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 SOD2P04179 222 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 USP17L7P0C7H9 530 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 TCF4P15884 667 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 CYP2F1P24903 491 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 GLUD2P49448 558 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 NDUFV1P49821 464 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 RABGGTBP53611 331 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 IFRD2Q12894 506 aaPredicted RBP12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 GPR17Q13304 367 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 SMTNL2Q2TAL5 461 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 RTP2Q5QGT7 225 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 SCYL2Q6P3W7 929 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 SPOCD1Q6ZMY3 1216 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 STRADAQ7RTN6 431 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 GPRIN1Q7Z2K8 1008 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 TMCO2Q7Z6W1 182 aaPredicted RBP12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 FIBCD1Q8N539 461 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 RIN2Q8WYP3 895 aaPredicted RBP12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 PIK3R5Q8WYR1 880 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 ANKRD7Q92527 254 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 HSPH1Q92598 858 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 KHSRPQ92945 711 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 C8orf48Q96LL4 319 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 SLITRK1Q96PX8 696 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 TBCBQ99426 244 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 ZBED2Q9BTP6 218 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 LRRC1Q9BTT6 524 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 OSBPL8Q9BZF1 889 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 MTIF3Q9H2K0 278 aaKnown RBP12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 ANKZF1Q9H8Y5 726 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 RRN3Q9NYV6 651 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 SPG21Q9NZD8 308 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 MTRRQ9UBK8 725 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 BACE2Q9Y5Z0 518 aa12.14□□□□□ -0.47
SNRNP35-202ENST00000412157 COL4A4P53420 1690 aaPredicted RBP12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 GBF1Q92538 1859 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 ERLIN1O75477 346 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 TJP3O95049 919 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 URODP06132 367 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 RALAP11233 206 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 CHRNA3P32297 505 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 PTPN7P35236 360 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 SLC5A3P53794 718 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 DEUP1Q05D60 604 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 KRT81Q14533 505 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 SLC25A52Q3SY17 297 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 ATP13A4Q4VNC1 1196 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 BOLA3Q53S33 107 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 DCAF6Q58WW2 860 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 TFDP3Q5H9I0 405 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 ZNF697Q5TEC3 545 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 TXNRD3NBQ6F5E7 133 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 PRSS55Q6UWB4 352 aaPredicted RBP12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 MFSD7Q6UXD7 560 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 TAS1R1Q7RTX1 841 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 MAATS1Q7Z4T9 603 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 RNF168Q8IYW5 571 aaPredicted RBP12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 ARFGAP1Q8N6T3 406 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 TEKT4Q8WW24 435 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 NDRG1Q92597 394 aaKnown RBP12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 MAGOHBQ96A72 148 aaKnown RBP12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 PGLYRP2Q96PD5 576 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 SLC2A13Q96QE2 648 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 SLC9A7Q96T83 725 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 PARD6BQ9BYG5 372 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 DDX47Q9H0S4 455 aaKnown RBP12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 EPC1Q9H2F5 836 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 STK39Q9UEW8 545 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 RASAL2Q9UJF2 1139 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 PCDHB12Q9Y5F1 795 aa12.13□□□□□ -0.47
SNRNP35-202ENST00000412157 CDY1Q9Y6F8 540 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms