RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 C1orf228Q6PIY5 440 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 VSIG1Q86XK7 387 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 ZBED8Q8IZ13 594 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 PQLC3Q8N755 202 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 CENPIQ92674 756 aaPredicted RBP25.6■■□□□ 1.69
VRK2-202ENST00000412104 HNRNPABQ99729 332 aaKnown RBP25.6■■□□□ 1.69
VRK2-202ENST00000412104 TSPYL2Q9H2G4 693 aaPredicted RBP25.6■■□□□ 1.69
VRK2-202ENST00000412104 SLC38A7Q9NVC3 462 aa25.6■■□□□ 1.69
VRK2-202ENST00000412104 ALOX15BO15296 676 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 CDH16O75309 829 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 ACAT1P24752 427 aaKnown RBP25.59■■□□□ 1.69
VRK2-202ENST00000412104 RDXP35241 583 aaKnown RBP25.59■■□□□ 1.69
VRK2-202ENST00000412104 GAD2Q05329 585 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 PDIA2Q13087 525 aaKnown RBP25.59■■□□□ 1.69
VRK2-202ENST00000412104 HIF1AQ16665 826 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 WSCD1Q658N2 575 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 DARS2Q6PI48 645 aaKnown RBP25.59■■□□□ 1.69
VRK2-202ENST00000412104 B4GALNT4Q76KP1 1039 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 FUKQ8N0W3 1084 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 PLD5Q8N7P1 536 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 ZNF670Q9BS34 389 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 CHST12Q9NRB3 414 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 APOL1O14791 398 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 SEPT4O43236 478 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 TGM2P21980 687 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 MGAT3Q09327 533 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 PIGZQ86VD9 579 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 HACE1Q8IYU2 909 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 TAB3Q8N5C8 712 aaPredicted RBP25.59■■□□□ 1.69
VRK2-202ENST00000412104 PCDH19Q8TAB3 1148 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 GAD1Q99259 594 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 PHACTR1Q9C0D0 580 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 INTS9Q9NV88 658 aaKnown RBP25.59■■□□□ 1.69
VRK2-202ENST00000412104 EURLQ9NYK6 297 aa25.59■■□□□ 1.69
VRK2-202ENST00000412104 ADAMTS4O75173 837 aa25.58■■□□□ 1.69
VRK2-202ENST00000412104 STIP1P31948 543 aaKnown RBP25.58■■□□□ 1.69
VRK2-202ENST00000412104 ATXN1P54253 815 aaKnown RBP25.58■■□□□ 1.69
VRK2-202ENST00000412104 NRLP54845 237 aa25.58■■□□□ 1.69
VRK2-202ENST00000412104 NKX3-2P78367 333 aa25.58■■□□□ 1.69
VRK2-202ENST00000412104 SLC9A4Q6AI14 798 aa25.58■■□□□ 1.69
VRK2-202ENST00000412104 CYP4X1Q8N118 509 aa25.58■■□□□ 1.69
VRK2-202ENST00000412104 LPPQ93052 612 aa25.58■■□□□ 1.69
VRK2-202ENST00000412104 FAF2Q96CS3 445 aa25.58■■□□□ 1.69
VRK2-202ENST00000412104 DUSP16Q9BY84 665 aa25.58■■□□□ 1.69
VRK2-202ENST00000412104 ABT1Q9ULW3 272 aaKnown RBP25.58■■□□□ 1.69
VRK2-202ENST00000412104 H7C0C1 242 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 GABRDO14764 452 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 BANF1O75531 89 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 CAPN15O75808 1086 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 PTPN1P18031 435 aaKnown RBP25.57■■□□□ 1.68
VRK2-202ENST00000412104 ATP5OP48047 213 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 AFF1P51825 1210 aaKnown RBP25.57■■□□□ 1.68
VRK2-202ENST00000412104 TBK1Q9UHD2 729 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 NAALADL1Q9UQQ1 740 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 EXOC1LA0A1B0GW35 172 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 CLDN5O00501 218 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 TMEM63AO94886 807 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 FAM163BP0C2L3 166 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 CREB1P16220 341 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 ARL4CP56559 192 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 PRKCZQ05513 592 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 ADIGQ0VDE8 80 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 PPP6R3Q5H9R7 873 aaPredicted RBP25.57■■□□□ 1.68
VRK2-202ENST00000412104 CCDC13Q8IYE1 715 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 VPS37BQ9H9H4 285 aa25.57■■□□□ 1.68
VRK2-202ENST00000412104 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.57■■□□□ 1.68
VRK2-202ENST00000412104 TCRBV7S3A2A0A539 114 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 FOXO6A8MYZ6 492 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 ZNF487B1APH4 448 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 THP07101 528 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 NPR3P17342 541 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 BCAR1P56945 870 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 SLC8A3P57103 927 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 BASP1P80723 227 aaKnown RBP25.56■■□□□ 1.68
VRK2-202ENST00000412104 CACNB2Q08289 660 aaPredicted RBP25.56■■□□□ 1.68
VRK2-202ENST00000412104 DPYSL2Q16555 572 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 EFHC1Q5JVL4 640 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 VSTM1Q6UX27 236 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 PAQR9Q6ZVX9 377 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 RPAINQ86UA6 219 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 RIBC1Q8N443 379 aaPredicted RBP25.56■■□□□ 1.68
VRK2-202ENST00000412104 SENP8Q96LD8 212 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 AGO3Q9H9G7 860 aaKnown RBP25.56■■□□□ 1.68
VRK2-202ENST00000412104 XPNPEP3Q9NQH7 507 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 MIOSQ9NXC5 875 aa25.56■■□□□ 1.68
VRK2-202ENST00000412104 SMAPO00193 183 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 BEST1O76090 585 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 GCAP28676 217 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 L1CAMP32004 1257 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 QPCTQ16769 361 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 MDH1BQ5I0G3 518 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 FNBP1LQ5T0N5 605 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 KIAA0319Q5VV43 1072 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 CAPN12Q6ZSI9 719 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 ANKMY2Q8IV38 441 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 CHMP6Q96FZ7 201 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 DDX43Q9NXZ2 648 aaKnown RBP25.55■■□□□ 1.68
VRK2-202ENST00000412104 AP4E1Q9UPM8 1137 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 HEY1Q9Y5J3 304 aa25.55■■□□□ 1.68
VRK2-202ENST00000412104 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms