RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 WNT16Q9UBV4 365 aa8.65□□□□□ -1.02
RPE-204ENST00000411934 MUTYHQ9UIF7 546 aa8.65□□□□□ -1.02
RPE-204ENST00000411934 COL4A2P08572 1712 aa8.65□□□□□ -1.03
RPE-204ENST00000411934 MUC3AQ02505 3323 aa8.65□□□□□ -1.03
RPE-204ENST00000411934 A0A0C4DFX4 3053 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 HEPACAM2A8MVW5 462 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 CYP26A1O43174 497 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 TLR5O60602 858 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 GPR37L1O60883 481 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 CKMP06732 381 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 ASGR2P07307 311 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 GLI1P08151 1106 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 CYP11B1P15538 503 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 GJA1P17302 382 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 HDCP19113 662 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 KRT9P35527 623 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 PBX1P40424 430 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 TKTL1P51854 596 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 UBASH3AP57075 661 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 PRKCQQ04759 706 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 GOLGA8FQ08AF8 430 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 GOLGA8DPQ0D2H9 430 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 ADIGQ0VDE8 80 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 NNTQ13423 1086 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 TRIM14Q14142 442 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 NR1I3Q14994 352 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 ZNF77Q15935 545 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 STXBP5Q5T5C0 1151 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 TXNDC8Q6A555 127 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 TANGO2Q6ICL3 276 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 SARM1Q6SZW1 724 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 VITQ6UXI7 678 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 GPRIN1Q7Z2K8 1008 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 CACNA2D4Q7Z3S7 1137 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 TMEM110Q86TL2 294 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 ZDHHC17Q8IUH5 632 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 IPO4Q8TEX9 1081 aaKnown RBP8.64□□□□□ -1.03
RPE-204ENST00000411934 USP13Q92995 863 aaPredicted RBP8.64□□□□□ -1.03
RPE-204ENST00000411934 SECISBP2LQ93073 1101 aaKnown RBP8.64□□□□□ -1.03
RPE-204ENST00000411934 OTUB2Q96DC9 234 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 PCMTD1Q96MG8 357 aaPredicted RBP8.64□□□□□ -1.03
RPE-204ENST00000411934 ZSWIM3Q96MP5 696 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 ZSWIM1Q9BR11 485 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 SLC4A5Q9BY07 1137 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 TTYH3Q9C0H2 523 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 ABCC13Q9NSE7 274 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.64□□□□□ -1.03
RPE-204ENST00000411934 ASNSD1Q9NWL6 643 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 GMIPQ9P107 970 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 AJAP1Q9UKB5 411 aaPredicted RBP8.64□□□□□ -1.03
RPE-204ENST00000411934 CUL9Q8IWT3 2517 aa8.64□□□□□ -1.03
RPE-204ENST00000411934 C2orf78A6NCI8 922 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 PRR33A8MZF0 331 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 ARNTLO00327 626 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 DLL1O00548 723 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 NRG2O14511 850 aaPredicted RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 SLC9A3R1O14745 358 aaPredicted RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 ZNF263O14978 683 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 EPHB6O15197 1021 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 PRAMEF12O95522 483 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 FERP16591 822 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 ATP5C1P36542 298 aaKnown RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 USP8P40818 1118 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 GSCP56915 257 aaPredicted RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 DAOAP59103 153 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 CDR2Q01850 454 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 APBA1Q02410 837 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 IFRD2Q12894 506 aaPredicted RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 PDCLQ13371 301 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 MTF1Q14872 753 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 PDGFRLQ15198 375 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 PMF1Q6P1K2 205 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 MSANTD2Q6P1R3 559 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 TRIM67Q6ZTA4 783 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 SLC47A2Q86VL8 602 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 YAF2Q8IY57 180 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 TMEM35BQ8NCS4 154 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 C1orf131Q8NDD1 294 aaKnown RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 DDX1Q92499 740 aaKnown RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 SYN2Q92777 582 aaPredicted RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 GOLGA1Q92805 767 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 EXOC4Q96A65 974 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 SHDQ96IW2 340 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 KXD1Q9BQD3 176 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 ULBP1Q9BZM6 244 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 C8orf33Q9H7E9 229 aaPredicted RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 BRD9Q9H8M2 597 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 TRPC7Q9HCX4 862 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 TBC1D14Q9P2M4 693 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 DNMT3LQ9UJW3 386 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 NAGPAQ9UK23 515 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 NOCTQ9UK39 431 aaKnown RBP8.63□□□□□ -1.03
RPE-204ENST00000411934 ZNF510Q9Y2H8 683 aa8.63□□□□□ -1.03
RPE-204ENST00000411934 MYO10Q9HD67 2058 aa8.62□□□□□ -1.03
RPE-204ENST00000411934 A0A1W2PQH9 124 aa8.62□□□□□ -1.03
RPE-204ENST00000411934 E2F8A0AVK6 867 aa8.62□□□□□ -1.03
RPE-204ENST00000411934 TEX33O43247 280 aa8.62□□□□□ -1.03
RPE-204ENST00000411934 COCHO43405 550 aa8.62□□□□□ -1.03
RPE-204ENST00000411934 LATS1O95835 1130 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms