RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZC3H12AQ5D1E8 599 aaKnown RBP14.16□□□□□ -0.14
LIMS1-205ENST00000410093 MAP3K21Q5TCX8 1036 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 TWF2Q6IBS0 349 aaKnown RBP14.16□□□□□ -0.14
LIMS1-205ENST00000410093 TADA2BQ86TJ2 420 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 C12orf29Q8N999 325 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 KBTBD7Q8WVZ9 684 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 KCTD13Q8WZ19 329 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 HSPH1Q92598 858 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 PRCCQ92733 491 aaPredicted RBP14.16□□□□□ -0.14
LIMS1-205ENST00000410093 ARHGEF2Q92974 986 aaKnown RBP14.16□□□□□ -0.14
LIMS1-205ENST00000410093 C18orf25Q96B23 403 aaPredicted RBP14.16□□□□□ -0.14
LIMS1-205ENST00000410093 RTP4Q96DX8 246 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 CHMP6Q96FZ7 201 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 TMEM121Q9BTD3 319 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 DDX23Q9BUQ8 820 aaKnown RBP14.16□□□□□ -0.14
LIMS1-205ENST00000410093 CRISPLD2Q9H0B8 497 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.16□□□□□ -0.14
LIMS1-205ENST00000410093 PAK5Q9P286 719 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 PCSK1NQ9UHG2 260 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 BCLAF3A2AJT9 711 aaKnown RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 E7ESA3 106 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 APOL1O14791 398 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 GPR182O15218 404 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 CHADO15335 359 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 PAPSS1O43252 624 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 RBP3P10745 1247 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 CHN1P15882 459 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 PECAM1P16284 738 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 AKAP5P24588 427 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 LHX1P48742 406 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 AIF1P55008 147 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 LILRA4P59901 499 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 DPYSL2Q16555 572 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 KCNT1Q5JUK3 1230 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 GKAP1Q5VSY0 366 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 SLC9A4Q6AI14 798 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 ARHGEF18Q6ZSZ5 1173 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 ADGRF2Q8IZF7 708 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 PDIK1LQ8N165 341 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 ATP11CQ8NB49 1132 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 SMG8Q8ND04 991 aaKnown RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 FAM172AQ8WUF8 416 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 TMEM40Q8WWA1 233 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 PPP1R10Q96QC0 940 aaKnown RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 C11orf84Q9BUA3 381 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 SAYSD1Q9NPB0 183 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 PPANQ9NQ55 473 aaKnown RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 TMEM51Q9NW97 253 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 GIT1Q9Y2X7 761 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 ARHGEF37A1IGU5 675 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 DCDC2CA8MYV0 355 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 FBXO21O94952 628 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 IFNB1P01574 187 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 SKIP12755 728 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 CYBAP13498 195 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 CORO7P57737 925 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 HIC1Q14526 733 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 LONRF1Q17RB8 773 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 KLHL38Q2WGJ6 581 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 TTC19Q6DKK2 380 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 FAM43BQ6ZT52 329 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 CYP4V2Q6ZWL3 525 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 CPLX4Q7Z7G2 160 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 EXOC3L1Q86VI1 746 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 FAM228AQ86W67 206 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 CDKL3Q8IVW4 592 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 NAT8LQ8N9F0 302 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 B3GALNT2Q8NCR0 500 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 PAWRQ96IZ0 340 aaKnown RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 SELENOSQ9BQE4 189 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 DUSP16Q9BY84 665 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 SSU72Q9NP77 194 aaKnown RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 NGRNQ9NPE2 291 aaKnown RBP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.15□□□□□ -0.14
LIMS1-205ENST00000410093 HES2Q9Y543 173 aa14.15□□□□□ -0.14
LIMS1-205ENST00000410093 EXOC1LA0A1B0GW35 172 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 GABRDO14764 452 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 PPEF2O14830 753 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 C6orf222P0C671 652 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-205ENST00000410093 CCND3P30281 292 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-205ENST00000410093 ZNF135P52742 658 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-205ENST00000410093 IFI35P80217 286 aaPredicted RBP14.14□□□□□ -0.15
LIMS1-205ENST00000410093 BEX3Q00994 111 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 RNASELQ05823 741 aaKnown RBP14.14□□□□□ -0.15
LIMS1-205ENST00000410093 ANKRD20A8PQ5CZ79 823 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 GNASQ5JWF2 1037 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 GLRA4Q5JXX5 417 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 DARS2Q6PI48 645 aaKnown RBP14.14□□□□□ -0.15
LIMS1-205ENST00000410093 SCUBE3Q8IX30 993 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 ANKS4BQ8N8V4 417 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 ATXN2LQ8WWM7 1075 aaKnown RBP14.14□□□□□ -0.15
LIMS1-205ENST00000410093 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.15
LIMS1-205ENST00000410093 SGSM3Q96HU1 749 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 PEBP4Q96S96 227 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 FAM118BQ9BPY3 351 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 FERMT1Q9BQL6 677 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 PLCD4Q9BRC7 762 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 APOL6Q9BWW8 343 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 PCDH18Q9HCL0 1135 aa14.14□□□□□ -0.15
LIMS1-205ENST00000410093 FAM49BQ9NUQ9 324 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms