RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 LRPAP1P30533 357 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 RDXP35241 583 aaKnown RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 FLT3P36888 993 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 CDR1P51861 262 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 MRPS6P82932 125 aaKnown RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 BEX3Q00994 111 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 IFFO1Q0D2I5 559 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 BYSLQ13895 437 aaKnown RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 UBXN11Q5T124 520 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 FAM102AQ5T9C2 384 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 ALKBH2Q6NS38 261 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 RHBDF2Q6PJF5 856 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 MFSD7Q6UXD7 560 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 LIMS2Q7Z4I7 341 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 TMEM110Q86TL2 294 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 SESTD1Q86VW0 696 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 RELL1Q8IUW5 271 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 CYP4X1Q8N118 509 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 TOP6BLQ8N6T0 577 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 CMASQ8NFW8 434 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 TMEM40Q8WWA1 233 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 TNIP3Q96KP6 325 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 CITED4Q96RK1 184 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 HEMGNQ9BXL5 484 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 CAPS2Q9BXY5 557 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 ROPN1BQ9BZX4 212 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 STMN4Q9H169 189 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 ROPN1Q9HAT0 212 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 METTL5Q9NRN9 209 aaKnown RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 SLC38A7Q9NVC3 462 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 TUBGCP4Q9UGJ1 667 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 GTF2IRD1Q9UHL9 959 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 TRPV2Q9Y5S1 764 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 SCN10AQ9Y5Y9 1956 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 TRIP11Q15643 1979 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 C2CD4BA6NLJ0 364 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 KPNA7A9QM74 516 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 RARBP10826 455 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 NR1D1P20393 614 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 PAX3P23760 479 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 IVDP26440 423 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 GJC1P36383 396 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 ADCY8P40145 1251 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 ACADSBP45954 432 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 RPL34P49207 117 aaKnown RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 BCAT1P54687 386 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 VCPP55072 806 aaKnown RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 ADCY2Q08462 1091 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 SNX1Q13596 522 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 GOLGA7BQ2TAP0 167 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 C11orf91Q3C1V1 193 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 GNASQ5JWF2 1037 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 C6orf118Q5T5N4 469 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 BBS12Q6ZW61 710 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 APPL2Q8NEU8 664 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 JOSD2Q8TAC2 188 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 RHBDD1Q8TEB9 315 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 SLC35F5Q8WV83 523 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 ATG4AQ8WYN0 398 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 LENG1Q96BZ8 264 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 PGM2Q96G03 612 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 TBCBQ99426 244 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 MRPL45Q9BRJ2 306 aaKnown RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 HERPUD2Q9BSE4 406 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 RSAD1Q9HA92 442 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 CWC15Q9P013 229 aaKnown RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 IPPQ9Y573 584 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 CASP8AP2Q9UKL3 1982 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 SCN1AP35498 2009 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 C3orf70A6NLC5 250 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 A8MXQ7 604 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 ZNF487B1APH4 448 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 HUS1O60921 280 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 RECKO95980 971 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 PFKMP08237 780 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 WARSP23381 471 aaKnown RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 KDELR1P24390 212 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 KLRC2P26717 231 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 CST5P28325 142 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 GNL1P36915 607 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 SLC6A3Q01959 620 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 BST2Q10589 180 aaKnown RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 PDK2Q15119 407 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 SOWAHAQ2M3V2 549 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 KRT71Q3SY84 523 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 BOLA3Q53S33 107 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 DAB2IPQ5VWQ8 1189 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 TWF2Q6IBS0 349 aaKnown RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 OR6B2Q6IFH4 312 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 GSTA5Q7RTV2 222 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 PCGF5Q86SE9 256 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 FAM228AQ86W67 206 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 MAP7D3Q8IWC1 876 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 GJD3Q8N144 294 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 ALLCQ8N6M5 410 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 ANKRD52Q8NB46 1076 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 SMG8Q8ND04 991 aaKnown RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 OR6B3Q8NGW1 331 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 SLC35B2Q8TB61 432 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 UBA3Q8TBC4 463 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms