RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 R3HDM2Q9Y2K5 976 aaKnown RBP14.71□□□□□ -0.06
GPNMB-203ENST00000409458 YJEFN3A6XGL0 299 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 E7ENQ6 273 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 TTI1O43156 1089 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 PRPSAP2O60256 369 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 EFCAB14O75071 495 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 BAIAP3O94812 1187 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 SEC31AO94979 1220 aaKnown RBP14.7□□□□□ -0.06
GPNMB-203ENST00000409458 ZBED1O96006 694 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 TUBBP07437 444 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 DESP17661 470 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 CHRNA3P32297 505 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 ALDH7A1P49419 539 aaKnown RBP14.7□□□□□ -0.06
GPNMB-203ENST00000409458 SULT1E1P49888 294 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 COPS2P61201 443 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 YWHAZP63104 245 aaKnown RBP14.7□□□□□ -0.06
GPNMB-203ENST00000409458 PITX1P78337 314 aaPredicted RBP14.7□□□□□ -0.06
GPNMB-203ENST00000409458 GUCY2DQ02846 1103 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 PPP2R5EQ16537 467 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 TFDP3Q5H9I0 405 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 SCYL2Q6P3W7 929 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 RSPO2Q6UXX9 243 aaPredicted RBP14.7□□□□□ -0.06
GPNMB-203ENST00000409458 C1orf54Q8WWF1 131 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 ATG4AQ8WYN0 398 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 PGLYRP2Q96PD5 576 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 POPDC2Q9HBU9 364 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 IL23AQ9NPF7 189 aa14.7□□□□□ -0.06
GPNMB-203ENST00000409458 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.7□□□□□ -0.06
GPNMB-203ENST00000409458 ESYT3A0FGR9 886 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 TBC1D4O60343 1298 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 FYNP06241 537 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 MYBL2P10244 700 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 KDELR1P24390 212 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 MCM3P25205 808 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 GRIK1P39086 918 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 CETN2P41208 172 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 GPR15P49685 360 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 SLC5A3P53794 718 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 DR1Q01658 176 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 NFE2Q16621 373 aaPredicted RBP14.69□□□□□ -0.06
GPNMB-203ENST00000409458 DCAF6Q58WW2 860 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 PRSS55Q6UWB4 352 aaPredicted RBP14.69□□□□□ -0.06
GPNMB-203ENST00000409458 OTOP2Q7RTS6 562 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 RNF168Q8IYW5 571 aaPredicted RBP14.69□□□□□ -0.06
GPNMB-203ENST00000409458 TTC9BQ8N6N2 239 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 CMASQ8NFW8 434 aaPredicted RBP14.69□□□□□ -0.06
GPNMB-203ENST00000409458 CCDC26Q8TAB7 109 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 MAIP1Q8WWC4 291 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 FUBP3Q96I24 572 aaKnown RBP eCLIP14.69□□□□□ -0.06
GPNMB-203ENST00000409458 IGSF21Q96ID5 467 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 TRIM51Q9BSJ1 452 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 TTPALQ9BTX7 342 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 LRRC19Q9H756 370 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 GDF3Q9NR23 364 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 CHST7Q9NS84 486 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.69□□□□□ -0.06
GPNMB-203ENST00000409458 ZNF446Q9NWS9 450 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 NAALADL1Q9UQQ1 740 aa14.69□□□□□ -0.06
GPNMB-203ENST00000409458 BHMG1C9JSJ3 638 aaPredicted RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 TNFRSF10BO14763 440 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 TNFRSF8P28908 595 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 NOS2P35228 1153 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 COILP38432 576 aaPredicted RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 PTGIRP43119 386 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 FNTAP49354 379 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 ARSEP51690 589 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 ARPP19P56211 112 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 TAZQ16635 292 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 SLC25A52Q3SY17 297 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 SPOUT1Q5T280 376 aaKnown RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 SYPL2Q5VXT5 272 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 PM20D1Q6GTS8 502 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 CCDC137Q6PK04 289 aaKnown RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 KCNT2Q6UVM3 1135 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 TMCO3Q6UWJ1 677 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 C16orf59Q7L2K0 433 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 STRADAQ7RTN6 431 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 BNIPLQ7Z465 357 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 SCN4BQ8IWT1 228 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 CMTR2Q8IYT2 770 aaKnown RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 KCTD6Q8NC69 237 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 SCAMP5Q8TAC9 235 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 CASKIN2Q8WXE0 1202 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 NPY6RQ99463 290 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 FAM118BQ9BPY3 351 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 SNRNP25Q9BV90 132 aaKnown RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 DCLK3Q9C098 648 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 EPB41L5Q9HCM4 733 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 PRDM10Q9NQV6 1147 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 GPATCH2LQ9NWQ4 482 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 PCYOX1Q9UHG3 505 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 PCDHB5Q9Y5E4 795 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 MRPL42Q9Y6G3 142 aaKnown RBP14.68□□□□□ -0.06
GPNMB-203ENST00000409458 USP3Q9Y6I4 520 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 PLXNA3P51805 1871 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 MTMR11A4FU01 709 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 H7C4K7 107 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 VNN2O95498 520 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 LTFP02788 710 aa14.68□□□□□ -0.06
GPNMB-203ENST00000409458 CPB1P15086 417 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms