RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 MTA1Q13330 715 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 NNTQ13423 1086 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 ACAP1Q15027 740 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 PPP1R15BQ5SWA1 713 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 DNAJC24Q6P3W2 148 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 BHLHA9Q7RTU4 235 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 GPR149Q86SP6 731 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 KIAA1958Q8N8K9 716 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 STKLD1Q8NE28 680 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 ZNF707Q96C28 371 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-203ENST00000409254 ZNF653Q96CK0 615 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 MSLNLQ96KJ4 702 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 GUCD1Q96NT3 240 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 NECTIN4Q96NY8 510 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 LRRC3Q9BY71 257 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 ULBP1Q9BZM6 244 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 KCNF1Q9H3M0 494 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 POPDC2Q9HBU9 364 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 ABCC13Q9NSE7 274 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 TAS2R14Q9NYV8 317 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 PCDHA13Q9Y5I0 950 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 ADGRG1Q9Y653 693 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 COL6A3P12111 3177 aa13.67□□□□□ -0.22
LIMS2-203ENST00000409254 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 GOLGA6L9A6NEM1 432 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 DAB1O75553 588 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 GABBR2O75899 941 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 FOSL2P15408 326 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 IGFBP4P22692 258 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 WEE1P30291 646 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 MTHFRP42898 656 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 GPR15P49685 360 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 RGS7P49802 495 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 YWHAZP63104 245 aaKnown RBP13.66□□□□□ -0.22
LIMS2-203ENST00000409254 IFI16Q16666 785 aaKnown RBP13.66□□□□□ -0.22
LIMS2-203ENST00000409254 FAM102AQ5T9C2 384 aaPredicted RBP13.66□□□□□ -0.22
LIMS2-203ENST00000409254 CYP4A22Q5TCH4 519 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 CES5AQ6NT32 575 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 MSANTD2Q6P1R3 559 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 FAM183BPQ6ZVS7 135 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 SMRP1Q8NCR6 262 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 SCAMP5Q8TAC9 235 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 SMG7Q92540 1137 aaKnown RBP13.66□□□□□ -0.22
LIMS2-203ENST00000409254 RIPOR3Q96MK2 946 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 SLC2A13Q96QE2 648 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 ADAM7Q9H2U9 754 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 IL21Q9HBE4 155 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 TRPM5Q9NZQ8 1165 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 CNOT8Q9UFF9 292 aaKnown RBP13.66□□□□□ -0.22
LIMS2-203ENST00000409254 TMEM59LQ9UK28 342 aa13.66□□□□□ -0.22
LIMS2-203ENST00000409254 DPYSL4O14531 572 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 ZSCAN12O43309 604 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 KRT86O43790 486 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 TBX10O75333 385 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 RFPL2O75678 378 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 SOAT2O75908 522 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 CSPG5O95196 566 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 OLFM2O95897 454 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 RHOP08100 348 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 SPATA31D3P0C874 917 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 RALAP11233 206 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 KRT3P12035 628 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 LCP1P13796 627 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 RRM1P23921 792 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 SSTR3P32745 418 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-203ENST00000409254 PTPN9P43378 593 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 YWHAGP61981 247 aaKnown RBP eCLIP13.65□□□□□ -0.22
LIMS2-203ENST00000409254 USP46P62068 366 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 KIF5AQ12840 1032 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 TAF10Q12962 218 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 MAMLD1Q13495 774 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 MTF1Q14872 753 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 OR6B2Q6IFH4 312 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 SYCE2Q6PIF2 218 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 SPATA31D4Q6ZUB0 917 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 PDZD4Q76G19 769 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-203ENST00000409254 GPIHBP1Q8IV16 184 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 RNF10Q8N5U6 811 aaKnown RBP13.65□□□□□ -0.22
LIMS2-203ENST00000409254 NIPA2Q8N8Q9 360 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 MRPS31Q92665 395 aaKnown RBP13.65□□□□□ -0.22
LIMS2-203ENST00000409254 NT5C3BQ969T7 300 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 TRIM44Q96DX7 344 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-203ENST00000409254 PGAP3Q96FM1 320 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-203ENST00000409254 SELENOOQ9BVL4 669 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 THAP2Q9H0W7 228 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 CLEC1BQ9P126 229 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 STAP1Q9ULZ2 295 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 COG5Q9UP83 839 aa13.65□□□□□ -0.22
LIMS2-203ENST00000409254 REXO2Q9Y3B8 237 aaKnown RBP13.65□□□□□ -0.22
LIMS2-203ENST00000409254 ZFP37Q9Y6Q3 630 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-203ENST00000409254 NCOR1O75376 2440 aa13.64□□□□□ -0.23
LIMS2-203ENST00000409254 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-203ENST00000409254 ZNF840PA6NDX5 716 aa13.64□□□□□ -0.23
LIMS2-203ENST00000409254 TMCO5BA8MYB1 307 aa13.64□□□□□ -0.23
LIMS2-203ENST00000409254 CCL16O15467 120 aa13.64□□□□□ -0.23
LIMS2-203ENST00000409254 TADA3O75528 432 aa13.64□□□□□ -0.23
LIMS2-203ENST00000409254 OAS1P00973 400 aaKnown RBP13.64□□□□□ -0.23
LIMS2-203ENST00000409254 F11P03951 625 aa13.64□□□□□ -0.23
LIMS2-203ENST00000409254 USP17L7P0C7H9 530 aa13.64□□□□□ -0.23
LIMS2-203ENST00000409254 MAN1A1P33908 653 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms