RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 L1TD1Q5T7N2 865 aaKnown RBP17.75■□□□□ 0.43
CHMP3-203ENST00000409225 LIMS2Q7Z4I7 341 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 BBS7Q8IWZ6 715 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 CHPFQ8IZ52 775 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 MYCBPAPQ8TBZ2 947 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 SETD7Q8WTS6 366 aaKnown RBP17.75■□□□□ 0.43
CHMP3-203ENST00000409225 OTUB2Q96DC9 234 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 ANKRD36BP1Q96IX9 119 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 MMS19Q96T76 1030 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 STRA6Q9BX79 667 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 PCIF1Q9H4Z3 704 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 SCUBE2Q9NQ36 999 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 SPHK2Q9NRA0 654 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 PCOLCE2Q9UKZ9 415 aa17.75■□□□□ 0.43
CHMP3-203ENST00000409225 COCHO43405 550 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 CBFA2T3O75081 653 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 IRF1P10914 325 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 WARSP23381 471 aaKnown RBP17.74■□□□□ 0.43
CHMP3-203ENST00000409225 WDR45BQ5MNZ6 344 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 GRAMD4Q6IC98 578 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 SDE2Q6IQ49 451 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 TMEM25Q86YD3 366 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 MARCH9Q86YJ5 346 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 FOXJ1Q92949 421 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 ZFRQ96KR1 1074 aaKnown RBP17.74■□□□□ 0.43
CHMP3-203ENST00000409225 CBWD1Q9BRT8 395 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 IL21RQ9HBE5 538 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 CD248Q9HCU0 757 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 TMEM30AQ9NV96 361 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 RAD54BQ9Y620 910 aa17.74■□□□□ 0.43
CHMP3-203ENST00000409225 PTPRJQ12913 1337 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 PTPRBP23467 1997 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 MEI4A8MW99 385 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 GCNT3O95395 438 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 GARTP22102 1010 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 YWHAQP27348 245 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 KIAA1324Q6UXG2 1013 aaKnown RBP17.73■□□□□ 0.43
CHMP3-203ENST00000409225 GLRX5Q86SX6 157 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 SYCP3Q8IZU3 236 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 GLIS3Q8NEA6 775 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 OR5B17Q8NGF7 314 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 ADAM32Q8TC27 787 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 FBXO32Q969P5 355 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 WBP2Q969T9 261 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 CRELD1Q96HD1 420 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 MRPL45Q9BRJ2 306 aaKnown RBP17.73■□□□□ 0.43
CHMP3-203ENST00000409225 ZDHHC5Q9C0B5 715 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 ZNF518BQ9C0D4 1074 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 SNX25Q9H3E2 840 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 DNAJC17Q9NVM6 304 aaKnown RBP17.73■□□□□ 0.43
CHMP3-203ENST00000409225 INTS13Q9NVM9 706 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 STARD13Q9Y3M8 1113 aa17.73■□□□□ 0.43
CHMP3-203ENST00000409225 FLNBO75369 2602 aaKnown RBP17.72■□□□□ 0.43
CHMP3-203ENST00000409225 TNNC2P02585 160 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 LONP1P36776 959 aaKnown RBP17.72■□□□□ 0.43
CHMP3-203ENST00000409225 GNL1P36915 607 aaPredicted RBP17.72■□□□□ 0.43
CHMP3-203ENST00000409225 HECTD3Q5T447 861 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 TMPRSS7Q7RTY8 843 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 ZCCHC9Q8N567 271 aaKnown RBP17.72■□□□□ 0.43
CHMP3-203ENST00000409225 SCFD1Q8WVM8 642 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 MRGPRX1Q96LB2 322 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 MIR1-1HGQ9H1L0 117 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 CCSER2Q9H7U1 834 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 SEL1LQ9UBV2 794 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 CHORDC1Q9UHD1 332 aaPredicted RBP17.72■□□□□ 0.43
CHMP3-203ENST00000409225 KIF3AQ9Y496 699 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 NME7Q9Y5B8 376 aa17.72■□□□□ 0.43
CHMP3-203ENST00000409225 URB1O60287 2271 aaKnown RBP17.72■□□□□ 0.43
CHMP3-203ENST00000409225 A0A1B0GTW7 788 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 GOLGA8CPA6NN73 597 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 CLDN5O00501 218 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 PTPN1P18031 435 aaKnown RBP17.71■□□□□ 0.43
CHMP3-203ENST00000409225 CD6P30203 668 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 CASP5P51878 434 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 CYP4F3Q08477 520 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 NUP93Q8N1F7 819 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 PDZD8Q8NEN9 1154 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 OR6B3Q8NGW1 331 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 GABRG3Q99928 467 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 ELOVL4Q9GZR5 314 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 DPEP3Q9H4B8 488 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 GAREM1Q9H706 876 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 PRDM16Q9HAZ2 1276 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 CACNA2D2Q9NY47 1150 aa17.71■□□□□ 0.43
CHMP3-203ENST00000409225 KIAA1522Q9P206 1035 aaPredicted RBP17.71■□□□□ 0.43
CHMP3-203ENST00000409225 PRRT4C9JH25 899 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 NEDD8-MDP1E9PL57 170 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 H3BQV1 296 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 RTN3O95197 1032 aaPredicted RBP17.7■□□□□ 0.42
CHMP3-203ENST00000409225 PRB1P04280 392 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 ATXN1LP0C7T5 689 aaKnown RBP17.7■□□□□ 0.42
CHMP3-203ENST00000409225 GAP43P17677 238 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 GPD1LQ8N335 351 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 OVCA2Q8WZ82 227 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 TOE1Q96GM8 510 aaKnown RBP17.7■□□□□ 0.42
CHMP3-203ENST00000409225 FGFBP2Q9BYJ0 223 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 TM7SF3Q9NS93 570 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 DKK4Q9UBT3 224 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 PCDHB13Q9Y5F0 798 aa17.7■□□□□ 0.42
CHMP3-203ENST00000409225 HELZ2Q9BYK8 2649 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms