RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CENPIQ92674 756 aaPredicted RBP25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 P3H4Q92791 437 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 PGBD4Q96DM1 585 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 RBM15Q96T37 977 aaKnown RBP eCLIP25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 ADAM2Q99965 735 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 STMN4Q9H169 189 aaPredicted RBP25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 A0A0U1RQF3 1178 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 MDM4O15151 490 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 RBP3P10745 1247 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 TFE3P19532 575 aaPredicted RBP25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 ACLYP53396 1101 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 GUCY1A3Q02108 690 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 ADIGQ0VDE8 80 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 FAM26DQ5JW98 314 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 ERMARDQ5T6L9 678 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 PAQR9Q6ZVX9 377 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 SYT15Q9BQS2 421 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 DCDC2CA8MYV0 355 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 IVLP07476 585 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 FAM200BP0CF97 657 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 ROR1Q01973 937 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 NOMO1Q15155 1222 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 TRIM71Q2Q1W2 868 aaKnown RBP25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 ANKRD20A8PQ5CZ79 823 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 RNASEH2BQ5TBB1 312 aaKnown RBP25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 MAP3K21Q5TCX8 1036 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 KIAA0319Q5VV43 1072 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 DARS2Q6PI48 645 aaKnown RBP25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 NPNTQ6UXI9 565 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 VSIG1Q86XK7 387 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 UNC45BQ8IWX7 931 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 KCTD13Q8WZ19 329 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 C11orf84Q9BUA3 381 aaPredicted RBP25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 LRRC4Q9HBW1 653 aa25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 TIMM13Q9Y5L4 95 aaPredicted RBP25.73■■□□□ 1.71
DNMT3A-206ENST00000406659 APOL1O14791 398 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 AGTP01019 485 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 SKIP12755 728 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 MAGEA4P43358 317 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 SLCO1A2P46721 670 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 CDR1P51861 262 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 GDF10P55107 478 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 CA9Q16790 459 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 UPP1Q16831 310 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 C1orf228Q6PIY5 440 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 C3orf58Q8NDZ4 430 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 RAET1EQ8TD07 263 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 FAM149B1Q96BN6 582 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 SAYSD1Q9NPB0 183 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 UBN1Q9NPG3 1134 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 CRTAC1Q9NQ79 661 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 SHOC2Q9UQ13 582 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 POMCP01189 267 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 IL4RP24394 825 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 RPL22P35268 128 aaKnown RBP25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 FAM71DQ8N9W8 422 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 KRT82Q9NSB4 513 aa25.72■■□□□ 1.71
DNMT3A-206ENST00000406659 PCNTO95613 3336 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 H7C0C1 242 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 TRPA1O75762 1119 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 BEST1O76090 585 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 TGM2P21980 687 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 MATKP42679 507 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 ATP5OP48047 213 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 MAP3K7CLP57077 242 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 PPP6R3Q5H9R7 873 aaPredicted RBP25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 CLEC20AQ6ZU45 233 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 SIX6OS1Q8N1H7 587 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 PLD5Q8N7P1 536 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 ZNF670Q9BS34 389 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 CDH9Q9ULB4 789 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 SQORQ9Y6N5 450 aa25.71■■□□□ 1.71
DNMT3A-206ENST00000406659 ZNF487B1APH4 448 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 STIP1P31948 543 aaKnown RBP25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 CTCFP49711 727 aaPredicted RBP25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 BCAR1P56945 870 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 MRPS5P82675 430 aaKnown RBP25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 AUHQ13825 339 aaKnown RBP25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 LONRF1Q17RB8 773 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 STRADAQ7RTN6 431 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 ZC3H18Q86VM9 953 aaKnown RBP25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 PPIL6Q8IXY8 311 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 DEFB106AQ8N104 65 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 NDRG1Q92597 394 aaKnown RBP25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 C9orf72Q96LT7 481 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 SERPINB12Q96P63 405 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 CCDC77Q9BR77 488 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 PAAF1Q9BRP4 392 aa25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 DHX35Q9H5Z1 703 aaKnown RBP25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 CNOT10Q9H9A5 744 aaKnown RBP25.7■■□□□ 1.7
DNMT3A-206ENST00000406659 THSD7BQ9C0I4 1608 aa25.69■■□□□ 1.7
DNMT3A-206ENST00000406659 DAB1O75553 588 aa25.69■■□□□ 1.7
DNMT3A-206ENST00000406659 ODC1P11926 461 aa25.69■■□□□ 1.7
DNMT3A-206ENST00000406659 PCSK1P29120 753 aa25.69■■□□□ 1.7
DNMT3A-206ENST00000406659 L1CAMP32004 1257 aa25.69■■□□□ 1.7
DNMT3A-206ENST00000406659 LSP1P33241 339 aa25.69■■□□□ 1.7
DNMT3A-206ENST00000406659 ATXN1P54253 815 aaKnown RBP25.69■■□□□ 1.7
DNMT3A-206ENST00000406659 HNRNPH2P55795 449 aaKnown RBP25.69■■□□□ 1.7
DNMT3A-206ENST00000406659 ADCY1Q08828 1119 aa25.69■■□□□ 1.7
DNMT3A-206ENST00000406659 TIGD5Q53EQ6 642 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms