RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 BOP1Q14137 746 aaKnown RBP5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 SLC29A2Q14542 456 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 HLXQ14774 488 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 TAF12Q16514 161 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 FAM110CQ1W6H9 321 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 TRIM71Q2Q1W2 868 aaKnown RBP5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 ZNF362Q5T0B9 420 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 TMTC4Q5T4D3 741 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 FAM160B1Q5W0V3 765 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 PLAG1Q6DJT9 500 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 SULT6B1Q6IMI4 303 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 C1orf122Q6ZSJ8 110 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 MAATS1Q7Z4T9 603 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 LRRTM4Q86VH4 590 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 HERC6Q8IVU3 1022 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 FAM109AQ8N4B1 249 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 OR1N1Q8NGS0 311 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 HERVK_113Q902F9 699 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 SLC9A6Q92581 669 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 CAVIN3Q969G5 261 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 DDX23Q9BUQ8 820 aaKnown RBP5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 CNPPD1Q9BV87 410 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 UNC45AQ9H3U1 944 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 WASH6PQ9NQA3 447 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 RASSF1Q9NS23 344 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 ZMYND8Q9ULU4 1186 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 SPATA31A3Q5VYP0 1347 aa5.7□□□□□ -1.5
HMGB1P13-201ENST00000406019 SETD1BQ9UPS6 1966 aaKnown RBP5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 OVOL3O00110 214 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 KIAA0355O15063 1070 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 LDHCP07864 332 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 XRCC6P12956 609 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 CPT1AP50416 773 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 EIF5P55010 431 aaKnown RBP5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 G3BP1Q13283 466 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 ARHGEF7Q14155 803 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 TIGD6Q17RP2 521 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 SLC5A9Q2M3M2 681 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 RAP1GAP2Q684P5 730 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 TAF2Q6P1X5 1199 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 CRTC1Q6UUV9 634 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 MICALCLQ6ZW33 695 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 GATAD2AQ86YP4 633 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 CPOQ8IVL8 374 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 PSD4Q8NDX1 1056 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 FAM46DQ8NEK8 389 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 BBC3Q96PG8 261 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 PPP1R9BQ96SB3 815 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 PCDHAC1Q9H158 963 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 R3HDMLQ9H3Y0 253 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 MLXIPQ9HAP2 919 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 HESX1Q9UBX0 185 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 HERC5Q9UII4 1024 aaKnown RBP5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 HDAC9Q9UKV0 1011 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 CA14Q9ULX7 337 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 DTNAQ9Y4J8 743 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 RPS6KL1Q9Y6S9 549 aa5.69□□□□□ -1.5
HMGB1P13-201ENST00000406019 VWC2LB2RUY7 222 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 RAB27BO00194 218 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 POLRMTO00411 1230 aaKnown RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 C1QL1O75973 258 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 KIF20AO95235 890 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 GLP2RO95838 553 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 ITGA2BP08514 1039 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 ELFN1P0C7U0 828 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 ADD2P35612 726 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 FOLR3P41439 243 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 RARRES1P49788 294 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 RSRC2Q7L4I2 434 aaKnown RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 CCDC28AQ8IWP9 274 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 FTSJ3Q8IY81 847 aaKnown RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 MYCBPAPQ8TBZ2 947 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 RAPGEF4Q8WZA2 1011 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 RILPL2Q969X0 211 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 ZG16BQ96DA0 208 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 SEC62Q99442 399 aaKnown RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 PRPF18Q99633 342 aaKnown RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 SMOQ99835 787 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 PYM1Q9BRP8 204 aaKnown RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 PABPC3Q9H361 631 aaKnown RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 TP63Q9H3D4 680 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 SAYSD1Q9NPB0 183 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 PRDM8Q9NQV8 689 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 VPS45Q9NRW7 570 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 KIF17Q9P2E2 1029 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 IFT80Q9P2H3 777 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 SLC13A4Q9UKG4 626 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 TBC1D30Q9Y2I9 924 aa5.68□□□□□ -1.5
HMGB1P13-201ENST00000406019 OR2W5A6NFC9 320 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 ZAR1LA6NP61 321 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 DCLK1O15075 740 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 HOXC11O43248 304 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 SNX2O60749 519 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 MBD4O95243 580 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 CD4P01730 458 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 POLBP06746 335 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 PPP3CBP16298 524 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 MST1P26927 711 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms