RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 DDX6P26196 483 aaKnown RBP eCLIP30.82■■■□□ 2.52
USP42-202ENST00000404008 GABRB2P47870 512 aa30.82■■■□□ 2.52
USP42-202ENST00000404008 SNX16P57768 344 aa30.82■■■□□ 2.52
USP42-202ENST00000404008 GPR158Q5T848 1215 aa30.82■■■□□ 2.52
USP42-202ENST00000404008 TXNDC8Q6A555 127 aa30.82■■■□□ 2.52
USP42-202ENST00000404008 SLC30A5Q8TAD4 765 aa30.82■■■□□ 2.52
USP42-202ENST00000404008 IRGQQ8WZA9 623 aa30.82■■■□□ 2.52
USP42-202ENST00000404008 SYNCQ9H7C4 482 aa30.82■■■□□ 2.52
USP42-202ENST00000404008 HELZP42694 1942 aaKnown RBP30.82■■■□□ 2.52
USP42-202ENST00000404008 A0A1W2PQH9 124 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 SOBPA7XYQ1 873 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 ABL1P00519 1130 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 MMP8P22894 467 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 GBP2P32456 591 aaPredicted RBP30.81■■■□□ 2.52
USP42-202ENST00000404008 PSEN1P49768 467 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 ARHGAP18Q8N392 663 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 MSANTD4Q8NCY6 345 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 MCRS1Q96EZ8 462 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 ZSWIM3Q96MP5 696 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 TASP1Q9H6P5 420 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 OSER1Q9NX31 292 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 ZMYM5Q9UJ78 669 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 NR2E1Q9Y466 385 aa30.81■■■□□ 2.52
USP42-202ENST00000404008 ZFP37Q9Y6Q3 630 aaPredicted RBP30.81■■■□□ 2.52
USP42-202ENST00000404008 C2orf78A6NCI8 922 aa30.8■■■□□ 2.52
USP42-202ENST00000404008 YJEFN3A6XGL0 299 aa30.8■■■□□ 2.52
USP42-202ENST00000404008 E7ENQ6 273 aa30.8■■■□□ 2.52
USP42-202ENST00000404008 SP100P23497 879 aaPredicted RBP30.8■■■□□ 2.52
USP42-202ENST00000404008 NSFP46459 744 aaKnown RBP30.8■■■□□ 2.52
USP42-202ENST00000404008 YWHAGP61981 247 aaKnown RBP eCLIP30.8■■■□□ 2.52
USP42-202ENST00000404008 CDK17Q00537 523 aa30.8■■■□□ 2.52
USP42-202ENST00000404008 VPS36Q86VN1 386 aa30.8■■■□□ 2.52
USP42-202ENST00000404008 ACSF2Q96CM8 615 aaPredicted RBP30.8■■■□□ 2.52
USP42-202ENST00000404008 C18orf8Q96DM3 657 aa30.8■■■□□ 2.52
USP42-202ENST00000404008 SLC46A2Q9BY10 475 aa30.8■■■□□ 2.52
USP42-202ENST00000404008 SLITRK6Q9H5Y7 841 aa30.8■■■□□ 2.52
USP42-202ENST00000404008 NAGPAQ9UK23 515 aa30.8■■■□□ 2.52
USP42-202ENST00000404008 LAMP2P13473 410 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 BMP1P13497 986 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 TUBP50607 506 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 ACAD10Q6JQN1 1059 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 FAM183BPQ6ZVS7 135 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 PHF13Q86YI8 300 aaPredicted RBP30.79■■■□□ 2.52
USP42-202ENST00000404008 MAB21L3Q8N8X9 362 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 TDRD5Q8NAT2 981 aaKnown RBP30.79■■■□□ 2.52
USP42-202ENST00000404008 RPGRIP1Q96KN7 1286 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 PANX2Q96RD6 677 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 CHP1Q99653 195 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 TRPC7Q9HCX4 862 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 TAS2R14Q9NYV8 317 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 CLIC5Q9NZA1 410 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 EPS15L1Q9UBC2 864 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 PRKAG3Q9UGI9 489 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 ADAMTS1Q9UHI8 967 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 TCF20Q9UGU0 1960 aaKnown RBP30.79■■■□□ 2.52
USP42-202ENST00000404008 C2CD4DB7Z1M9 353 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 SART1O43290 800 aaKnown RBP30.79■■■□□ 2.52
USP42-202ENST00000404008 OAS1P00973 400 aaKnown RBP30.79■■■□□ 2.52
USP42-202ENST00000404008 GZMAP12544 262 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 EIF4A3P38919 411 aaKnown RBP30.79■■■□□ 2.52
USP42-202ENST00000404008 MAPK8IP2Q13387 824 aaPredicted RBP30.79■■■□□ 2.52
USP42-202ENST00000404008 C2CD6Q53TS8 623 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 MMS22LQ6ZRQ5 1243 aa30.79■■■□□ 2.52
USP42-202ENST00000404008 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP30.79■■■□□ 2.52
USP42-202ENST00000404008 SSU72P8A0A1W2PR75 194 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 PFKLP17858 780 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 PTP4A2Q12974 167 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 HECTD3Q5T447 861 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 PPP1R2P3Q6NXS1 205 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 OLFML1Q6UWY5 402 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 MON1BQ7L1V2 547 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 XYLT1Q86Y38 959 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 ZDHHC17Q8IUH5 632 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.78■■■□□ 2.52
USP42-202ENST00000404008 ADHFE1Q8IWW8 467 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 PIWIL1Q96J94 861 aaKnown RBP30.78■■■□□ 2.52
USP42-202ENST00000404008 SLC22A12Q96S37 553 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 C11orf70Q9BRQ4 267 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 CCSER2Q9H7U1 834 aa30.78■■■□□ 2.52
USP42-202ENST00000404008 MTPAPQ9NVV4 582 aaKnown RBP eCLIP30.78■■■□□ 2.52
USP42-202ENST00000404008 A0A087X0T9 212 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 TRAV19A0A0A6YYK7 116 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 FAM228BP0C875 321 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 RARGP13631 454 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 ASTE1Q2TB18 679 aaPredicted RBP30.77■■■□□ 2.52
USP42-202ENST00000404008 BSPRYQ5W0U4 402 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 OR6B2Q6IFH4 312 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 HFE2Q6ZVN8 426 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 CMTM8Q8IZV2 173 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 ZNF276Q8N554 614 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 ZSCAN18Q8TBC5 510 aaPredicted RBP30.77■■■□□ 2.52
USP42-202ENST00000404008 ADAM22Q9P0K1 906 aa30.77■■■□□ 2.52
USP42-202ENST00000404008 TMCO5BA8MYB1 307 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 GOLGA6L6A8MZA4 724 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 LOC730098B7Z3J9 87 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 TLR5O60602 858 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 OLFM2O95897 454 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 LTFP02788 710 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 WEE1P30291 646 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 ZP2Q05996 745 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms